Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2496 ATGACGTCACGTCCAGGGAATGGTGGTCATGCGACCAACAGCGGAAGGACACGTGTCGGCAAGTACGAGCTGGGTAGGACGCTGGGCGAGGGGAATTTCGCGAAGGTGAAGTTTGCAAAGAACACGGTCACCGGAGACAATGTCGCCATTAAGATTCTCGACAAGGAGAAAGTTCTCAAGCACAAGATGATCAACCAGATAAAACGAGAGATATCAACAATGAAACTGATTAGACACCCTAATGTAATACGTATGTATGAGGTCATGGCTAGCAAGACAAAAATATACATTGTATTGGAATTTGTAACTGGTGGAGAGCTCTTTGATAAAATTGCAAGCAGTGGGAGATTGAAAGAAGAAGAAGCTAGAAGATATTTTCAACAGCTAATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCATAGAGACCTAAAGCCTGAGAACTTGTTGCTGGATGCTACGGGAATGCTCAAAGTATCAGATTTTGGATTGAGTGCACTGCCTCAACAAGTTCGGGAAGATGGGCTGCTTCATACAACATGTGGTACGCCAAATTATGTTGCCCCAGAGGTGGTTCACAATAAAGGCTATGATGGTGCAAAGGCTGATCTCTGGTCATGTGGTGTCATTCTTTTCGTTTTAATGGCAGGCTATTTGCCCTTTGAAGACAACAATCTTGTGAATTTGTATAAAAAGATTTTCAAGGCTGAGTTCACTTGTCCTCCTTGGTTCTCTACGGATGCAAAGAAGTTAATCATAAGAATACTTGAACCCGATCCTGCCAAACGGATTACGATTGCTGAAGTCATTGAGAATGAATGGTTCAAGAAGGGATACAAGCCTCCCAAATTTGAGCAGGCCAATGTTAGTCTTGATGATATAGATTCTATTTTTAGTGAATCAATGGATTCACAAAACCTTGTTGCTGAGAGGCGTGAAACAAGGCCTGTGGAACCTGTGACCATGAATGCTTTTGAGCTTATCTCTACCTCTCAGGGCCTCAATCTCCGTAGTCTTTTCGAGAAACAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCAAATGAGATCATTACGAAAATCGAGGAAGCTGCTGGGCCTCTGGGTTTCGGTGTTAAGAAGAGCAACAATAAGTTAAAAATTCAAGGTGAAAAGACTGGGCGTAAAGGTCAACTATCTGTAGCTACCGAGATTTTTGAGATTGCTCCTGAACTTTATCTGGTTGAATTGCGGAAGGCTGAGGGAGATACTCTGGAATTTCACAAATTTTATAAAAACCTCTCTCCTGCACTGAAAGATATTGTTTGGAAAGCAGAGCCAATCGATGAAGAAAAAGATGATACCTAG 1368 0.4211 MTSRPGNGGHATNSGRTRVGKYELGRTLGEGNFAKVKFAKNTVTGDNVAIKILDKEKVLKHKMINQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASSGRLKEEEARRYFQQLICAVDYCHSRGVCHRDLKPENLLLDATGMLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVVHNKGYDGAKADLWSCGVILFVLMAGYLPFEDNNLVNLYKKIFKAEFTCPPWFSTDAKKLIIRILEPDPAKRITIAEVIENEWFKKGYKPPKFEQANVSLDDIDSIFSESMDSQNLVAERRETRPVEPVTMNAFELISTSQGLNLRSLFEKQMGLVKRETRFTSKCSANEIITKIEEAAGPLGFGVKKSNNKLKIQGEKTGRKGQLSVATEIFEIAPELYLVELRKAEGDTLEFHKFYKNLSPALKDIVWKAEPIDEEKDDT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2496 455 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 448 - -
Ahy13g2496 455 Gene3D Transferase(Phosphotransferase) domain 1 102 284 - -
Ahy13g2496 455 PANTHER SERINE/THREONINE KINASE 16 448 - -
Ahy13g2496 455 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2496 455 CDD CIPK_C 325 440 - -
Ahy13g2496 455 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g2496 455 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Ahy13g2496 455 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2496 455 CDD STKc_SnRK3 21 276 - -
Ahy13g2496 455 SUPERFAMILY Protein kinase-like (PK-like) 19 321 IPR011009 -
Ahy13g2496 455 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2496 455 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Ahy13g2496 455 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Ahy13g2496 455 Gene3D Kinase associated domain 1, KA1 319 444 - -
Ahy13g2496 455 Pfam NAF domain 321 381 IPR004041 GO:0007165
Ahy13g2496 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2496 Ahy-Chr13 68411885 68420998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2496 6 452 CBL-interacting serine-threonine protein kinases AT1G01140 69.316 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy13g2496 Pkinase 2.30E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2496 - - gmx:100788746 779.245