Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2493 ATGAGAGAGAGAGAGAGCGAGAGAGCATGTGAGGGGGGAAACACTGAGCGAGGTAGACTTAGGTTGTTTCAATGGGGTACAAAGGATCCTAGGGTTTGGAATCGGGAAGAATATTATCGCCTGGAAAAAGAATCTTTTTATGTATTTGTTGATAATTTACCGGAAGATATTTCAAAGAAGGAATTATACCACTTGTTTGGGTGGACGGGCAAAACCATTGACATATACCTCTCACGGAAACGTAAACAGGGATTGGTTTATCTTTTTGCTTTTGTACGATATACGACGAAAGGGGCCGCTCTGAAAGCGATCACGGAGATGAATCATATGAGGTTACGAGGGAAGTTATTGTCTATTAGTGAAGCAAAATTTAGAAGACACTTACAAGAGCGGGAACGATGGGTGCATGTGGATCAGAGGGTTTTATACGAGGGAAGGCATAAGGGAGCTGATAGTGGAAGCAAGGGAGAGCCTAAGGAATCTGATAGTGGAAAAGAAGGAGTTATTGCACAAGAGAGTGAGGTGAACAAGGATGATGCGCAAGAAGCTGACCATAGTAGGAAGAAGAGGGTTGACACTGCAGTAGCGCAAGCGAACTTGGAGTGGTTAGGGAGGAGCGTAGTAGGTAGCACTTTAAAATCGTTTGACATCCAATCGTTGAAAAGATCTATTTGCAAGATTGTGCCTTAG 690 0.4348 MRERESERACEGGNTERGRLRLFQWGTKDPRVWNREEYYRLEKESFYVFVDNLPEDISKKELYHLFGWTGKTIDIYLSRKRKQGLVYLFAFVRYTTKGAALKAITEMNHMRLRGKLLSISEAKFRRHLQERERWVHVDQRVLYEGRHKGADSGSKGEPKESDSGKEGVIAQESEVNKDDAQEADHSRKKRVDTAVAQANLEWLGRSVVGSTLKSFDIQSLKRSICKIVP* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2493 229 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 124 IPR000504 GO:0003723
Ahy13g2493 229 SUPERFAMILY RNA-binding domain, RBD 42 129 IPR035979 GO:0003676
Ahy13g2493 229 CDD RRM_SF 48 120 - -
Ahy13g2493 229 SMART rrm1_1 47 120 IPR000504 GO:0003723
Ahy13g2493 229 Gene3D - 31 174 IPR012677 -
Ahy13g2493 229 MobiDBLite consensus disorder prediction 146 191 - -
Ahy13g2493 229 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2493 Ahy-Chr13 67450835 67451524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2493 48 119 Eukaryotic Initiation Factors Gene Family AT3G16380 26.389 4.46e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2493 K12891 - aip:107633172 464.922