Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2488 ATGCAGCTTCCTCTCCTTGTCCTCCTCTGTGTCTTCTCCACCAAAATCGTCAACGCCTTCCTCTTCGACAATCCAGGTCAGCTTCCTTTCCTTCCTTTTCTCTCCTTTTCTTCCTTTTTGATGAGTCTCTCTTTTCCTTCCTTACCATTCAGATCTGCCGCTAGGGATTCCATTCCGCAGGAGAGGAATTCCTTTGTCAACTTCCAAGCCAAAACCGGTGTAGAGGAGATTGCTTTCTTCGATGTTACTCGAACAGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGGACCTAGCAATAACACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTGCTGTCTGTAAATTTGGGCATTTCCTGCGTGAACTATCTCACAAAACTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGGTAGAAGGTCATGAGAGGTGA 531 0.4463 MQLPLLVLLCVFSTKIVNAFLFDNPGQLPFLPFLSFSSFLMSLSFPSLPFRSAARDSIPQERNSFVNFQAKTGVEEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKDLAITLMGLSFMFATSWKLTLLALAVVPVIAVCKFGHFLRELSHKTQTAAAVASSIAEVEGHER* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2488 176 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 74 170 - -
Ahy13g2488 176 Gene3D ABC transporter type 1, transmembrane domain 74 171 IPR036640 GO:0005524|GO:0016021
Ahy13g2488 176 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 74 170 IPR039421 -
Ahy13g2488 176 Pfam ABC transporter transmembrane region 76 170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g2488 176 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 76 170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g2488 176 SUPERFAMILY ABC transporter transmembrane region 76 169 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2488 Ahy-Chr13 65399015 65403904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2488 75 170 Calmodulin-binding Proteins AT2G36910 31.313 1.65e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2488 - - aip:107621923 149.058