Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2464 ATGTTGATCATCGCTGTTGCTGCACTGACCATCGCTCTTCTTCACCATTCTTCTCATCATCGTCTTCTCTATCCTTCTTCACGGGGCATCTACCTGAGGGAGGCTACTGCTTTCCAACAATCTACTGAGCTAGGTCTCAGCTTGGACAAAGGGAAAGGAGCCGATAGAGCAGCAGCACCAGGAGTAGGCTTCTTGAAGCCACCAAAAGAGGCCTCCGGTAGCGGCAAGCACTTTCGCGATGATGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCTAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAGTATAGCTGAACGGTTGCGCAAAGAAAGAATAGCAGAAAGAATCAGGGCTCTACAAGAACTAGTTTCAAGTGTCAACAAGACGGATAGAACTGTAATGTTAGATGAAATAATTGATCTGCATTTGTTTATTTCAGATACTGCACTTATTTAA 525 0.4667 MLIIAVAALTIALLHHSSHHRLLYPSSRGIYLREATAFQQSTELGLSLDKGKGADRAAAPGVGFLKPPKEASGSGKHFRDDVLDARAKNVFHGQPMPTTIPAAPHPLTMRPRVRARRGQATDPHSIAERLRKERIAERIRALQELVSSVNKTDRTVMLDEIIDLHLFISDTALI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2464 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 164 IPR036638 GO:0046983
Ahy13g2464 174 Gene3D - 112 165 IPR036638 GO:0046983
Ahy13g2464 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 168 IPR011598 GO:0046983
Ahy13g2464 174 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 37 167 - -
Ahy13g2464 174 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2464 Ahy-Chr13 59666177 59669128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2464 39 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 63.433 1.06e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2464 - - ahf:114924986 327.791