Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2436 ATGCACATTTTGACTGTGTCGTCGCCGCCGCTAGAAGAGCACTCAACCGCAACAAAGGCAACGAATGGCCTTCTGCTTCCGGCGCTCACTGAGCCCGCTATCTCCGCACCATCGTTGCCAAGGTCGTCGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTGCGGAAAACCATTCAATGAAGCTGCCTGGGACATGGATGATGTTGCTAGTTGCTTCGAGATGGGGAACTAACGAGGATTTGATCATATCGATCTTGGGTCATCGAAATGCTGCTCAGAGGAAGCTGATTCGAAAAACTTATTTTGAGACTTATGGAGAAGATCTCCTCAAGGCCTTGGACAAGGAGCTTAGCAATGACTTCGAGAGGTTGGTACTTCTTTGGACACTTGATCCTGCTGAGCGAGATGCGTTTTTGGCGAACGAAGCAACCAAAAGATGGGCTTCAAGCAATCAGGTTTTGATGGAAATAGCTTGTACCAGGTCCTCTGACCAATTGCTTTTCGCAAGGAAGGCTTATCATGCTCGTTATAAAAAGTTTCTCGAGGAGGATGTTGCTCATCACACAACTGGGGAGTTCCGTAAGGTACTGCTTCTAGTTCTAGATCATAATTATGAGTGCGTTGTAAAATATTGTACATACATTAATGTGAAGCGTGTGTTGGAGACCATATGTCTGACACTCTTTCAAGCTTTCCAACACACACTCTTCTCTTATAACATCACACACCACACATCTCAATTTCTTGTTCCTTCAACAAATAGGGAAGCTGTGAAACACTTTGATCCTGCTCTTAGAGTTCCTCACAGCCATACCAAGCTTTATGTACGATCTAAGGAAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGGAACAACAAAGAACTTAGGGTTTAA 900 0.45 MHILTVSSPPLEEHSTATKATNGLLLPALTEPAISAPSLPRSSRERITSLSLNPLIAENHSMKLPGTWMMLLVASRWGTNEDLIISILGHRNAAQRKLIRKTYFETYGEDLLKALDKELSNDFERLVLLWTLDPAERDAFLANEATKRWASSNQVLMEIACTRSSDQLLFARKAYHARYKKFLEEDVAHHTTGEFRKVLLLVLDHNYECVVKYCTYINVKRVLETICLTLFQAFQHTLFSYNITHHTSQFLVPSTNREAVKHFDPALRVPHSHTKLYVRSKERKFERARGRRNNKELRV* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2436 299 Pfam Ribosomal protein 60S L18 and 50S L18e 254 298 IPR021131 -
Ahy13g2436 299 Pfam Annexin 75 129 IPR018502 GO:0005509|GO:0005544
Ahy13g2436 299 Pfam Annexin 138 201 IPR018502 GO:0005509|GO:0005544
Ahy13g2436 299 SUPERFAMILY Annexin 76 206 IPR037104 GO:0005509|GO:0005544
Ahy13g2436 299 SMART annex3 78 130 IPR018502 GO:0005509|GO:0005544
Ahy13g2436 299 SMART annex3 150 202 IPR018502 GO:0005509|GO:0005544
Ahy13g2436 299 Gene3D Annexin 59 132 IPR037104 GO:0005509|GO:0005544
Ahy13g2436 299 PANTHER ANNEXIN 76 207 - -
Ahy13g2436 299 Gene3D Annexin 133 203 IPR037104 GO:0005509|GO:0005544
Ahy13g2436 299 Gene3D - 226 298 - -
Ahy13g2436 299 PRINTS Annexin family signature 142 163 IPR001464 GO:0005509|GO:0005544
Ahy13g2436 299 PRINTS Annexin family signature 75 97 IPR001464 GO:0005509|GO:0005544
Ahy13g2436 299 PRINTS Annexin family signature 115 131 IPR001464 GO:0005509|GO:0005544
Ahy13g2436 299 PANTHER ANNEXIN D2 76 207 - -
Ahy13g2436 299 ProSiteProfiles Annexin repeat profile. 133 204 IPR018502 GO:0005509|GO:0005544
Ahy13g2436 299 ProSiteProfiles Annexin repeat profile. 45 132 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2436 Ahy-Chr13 56320902 56323136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2436 227 299 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 46.575 5.82e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2436 K17098 - pvy:116146942 230.335