Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2432 ATGCCATTGTCGTATATGTATAATCAAACACATGAAGTTCAAAGCCCGTGTTGCTTTAGATTCTGTTCAGTATTCACTATCACCAATTATTTAAAGGGATTCAGATACTCTGCTTCCTTCTCATCATTCACGAGTTCGTTCCGTGAACATCATTATTCCATGGCTTCCACCTCTCATAAACTCACCTTCCTCTTTTCTCTCACACTCTTTTTATTCTTCTCCTCATCACATGCTTATGCTGCTGTTAACTCTTCAAATTCCTCAACACTATTTCACACCAACCTTTCTTCCTTAAGATCTTTCTGCAAAACCACCCCTTACCCAGAAACATGCTTCGAATCACTGAAGCTTTCAATCTCAATAAACATAAGTCCAAACATCATTACCTACCTCCTTCACTCCCTACAAGTCGCAATTTCGGAAGCCACAAAGCTATCAACACTTTTCCAAAGCGTTGGTGCCTCAAACTCAAACATCAGAGAGAAACAAAAGGGTTCAATCCAAGACTGCAAGGAGCTTCACCAATCAACTTTAACATCTCTAAAGAGATCACTCTCCGGGGTTCGTAACTCCCAGAACTCAAGAAAATTGCGTGATGCTAGAACCTTCCTCAGTGCAGCACTCACAAACAAGAACACTTGTCTAGAAGGCCTAGACTCTGCTTCCGGAACCATGAAACAAAAACTGGTAAACTCCGTTATTAACACTTACAAGCACGTGAGTAATTCCCTCTCAATGCTTTCTAATCCAGGAAATGACGACAACGATGGCGGATTCATGAAGAAAAGCTTGGAAGATGGGGAGCAGTATGATCCAAACGAGGTGATTGTTGTGGCGAAAGATGGAACAGGGAACTTCAGCACTGTTTCTGATGCAATAAACTTTGCTCCCAATAACAGCTATGTGAGGACGGTAATCTATGTGAAAGAAGGGGTTTATGAGGAAAATGTTGAGATCCCAAGTTGTAAGCCTAACATTGTTCTTGTTGGAGATGGAAGTGACGTCACTCTCATTACTGGTAGCAGAAGTGGTGGTGATGGATGGACCACTTTCAGATCTGCAACTCTAGCTGTATCTGGTGATGGCTTTCTAGCACGTGACATAGCTTTTGAGAACAGTGCAGGTCCTGAGAAGCGTCAAGCAGTTGCACTAAGAGTAAACGCAGATTTAACCGCTTTCTACCGGTGTTCCATTTATGGTTACCAAGACACGCTCTATGTTCACTCCTTCAGACAATTCTACAGAGAATGCGACATTTACGGAACCATAGATTTCATATTCGGTAACGCCGCCGTAGTCCTACAAGAATGTAACATTGTTTCAAGAAAGCCATTGCCTGGCCAATTCACTGTGATAACGGCACAATCAAGAGATACGCCAGACGAGGACACCGGAATCTCGATCCAAAACTGCTCAATTATAGCCACAACTGATTTGTATGCAGCTTCAAACTCTAGCACTACCATTAAGAGCTACCTTGGTAGGCCATGGAGGGTTTATTCAAGAGTTGTTTATCTCGAGTCATACATTGATGACTTCATTGACCCAAAGGGTTGGTCAAAATGGTCTAATAGTGATGATGATCAAGGCTTGGATACTTTGTATTATGGAGAGTTTGAGAATTATGGACCTGGTTCAAGAACAAATGGACGTGTAAATTGGGTTGGCTACCATGTGATGAATTACAATGATGCCTATAACTTCACGGTTTCAGAGTTCATCACTGGTGATGCTTGGCTTGGGTCTACTTCTTTTCCTTATGATGATGGTATTTAA 1776 0.4195 MPLSYMYNQTHEVQSPCCFRFCSVFTITNYLKGFRYSASFSSFTSSFREHHYSMASTSHKLTFLFSLTLFLFFSSSHAYAAVNSSNSSTLFHTNLSSLRSFCKTTPYPETCFESLKLSISINISPNIITYLLHSLQVAISEATKLSTLFQSVGASNSNIREKQKGSIQDCKELHQSTLTSLKRSLSGVRNSQNSRKLRDARTFLSAALTNKNTCLEGLDSASGTMKQKLVNSVINTYKHVSNSLSMLSNPGNDDNDGGFMKKSLEDGEQYDPNEVIVVAKDGTGNFSTVSDAINFAPNNSYVRTVIYVKEGVYEENVEIPSCKPNIVLVGDGSDVTLITGSRSGGDGWTTFRSATLAVSGDGFLARDIAFENSAGPEKRQAVALRVNADLTAFYRCSIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECNIVSRKPLPGQFTVITAQSRDTPDEDTGISIQNCSIIATTDLYAASNSSTTIKSYLGRPWRVYSRVVYLESYIDDFIDPKGWSKWSNSDDDQGLDTLYYGEFENYGPGSRTNGRVNWVGYHVMNYNDAYNFTVSEFITGDAWLGSTSFPYDDGI* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2432 591 PANTHER PECTINESTERASE 67 590 - -
Ahy13g2432 591 SUPERFAMILY Pectin lyase-like 273 588 IPR011050 -
Ahy13g2432 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 94 249 IPR035513 -
Ahy13g2432 591 Gene3D - 271 591 IPR012334 -
Ahy13g2432 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 98 249 IPR035513 -
Ahy13g2432 591 PANTHER PECTINESTERASE 67 590 - -
Ahy13g2432 591 Pfam Plant invertase/pectin methylesterase inhibitor 97 246 IPR006501 GO:0004857
Ahy13g2432 591 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Ahy13g2432 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 247 IPR006501 GO:0004857
Ahy13g2432 591 SMART PMEI_2 93 246 IPR006501 GO:0004857
Ahy13g2432 591 Pfam Pectinesterase 276 577 IPR000070 GO:0030599|GO:0042545
Ahy13g2432 591 CDD PMEI-like_3 100 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2432 Ahy-Chr13 56154878 56159285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2432 96 591 Carbohydrate Esterase AT2G26440 65.769 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2432 - - aip:107630581 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2432 13 56154878 56159285 Ahy13g2432 13 56154878 56159285 ECH
Ahy13g2432 13 56154878 56159285 Ahy3g2184 3 68669984 68673915 hybridization