Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2409 ATGGCCAAAGGTGGAGGAAAACTAATGAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCATTCGGCAACATCACCACCACCACCAACAAGCAGAGCCGTTGCGGCGCCACCGTGAGCGCCGTCGCCAACGACGAACAATCCTCCGTGTCGGAAGCCGATTTCCGGCCCGTGTACGTGGGGAAGACGTGGCGGAGATACTTGGTGAGGCCGGACGTGGTGGAGCATCCACTTTTCCGAGAGCTCGTGGATAGATCACGTGAGTCCTACGACGACAACAACTTCGTCGTCGTGGAGGAGGACACTGTCCACGTGGCATGCGAGGTCGTGCTGTTCGAGCACCTGCTTTGGATGCTAGAAAACGCTGATCCTCAGCCTGAGTCACTCGACGAGCTCGTCGACTTCTATACTTGCTAG 414 0.5628 MAKGGGKLMKLKSVLKKWNSFGNITTTTNKQSRCGATVSAVANDEQSSVSEADFRPVYVGKTWRRYLVRPDVVEHPLFRELVDRSRESYDDNNFVVVEEDTVHVACEVVLFEHLLWMLENADPQPESLDELVDFYTC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2409 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 137 IPR003676 GO:0009733
Ahy13g2409 137 Pfam Auxin responsive protein 13 118 IPR003676 GO:0009733
Ahy13g2409 137 PANTHER SMALL AUXIN-UP RNA-RELATED 5 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2409 Ahy-Chr13 55212467 55213515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2409 4 120 Calmodulin-binding Proteins AT3G43120 25.694 3.25e-08 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2409 13 55212467 55213515 Ahy13g2409 13 55212467 55213515 ECH
Ahy13g2409 13 55212467 55213515 Ahy3g2161 3 66661864 66662860 hybridization