Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2408 ATGGGGGTGATGGGTGTTTTCAACACAAACTACAATTCGAAACTGTTTATCAATGTTGAGTTTCCAGCTGCCAGGGATTTCTTTGCGAGGGTGAACAAATTAGATCCTGTTGATGGACAAGGCATAATGTCGCTGGTCTGTGATCAACCTGTTTCAGTTGAAGAAGATTTTTTGCGTCTGTCAGTCTACAAAACAATTGCCGAGATAAAGGAGCATAATCAGGATGCTGTATCTGTTACAGCAGGGACGATTAAAGAAGTTGAGATCGAGTTTGGTTGGTGGTACAAAGGATGTAAGAAGTGTCGTCGTGGCTTAAGGGAAATTGAGAAAAGATATTTCTGTCCCAATTGCATTAGAGACTACGGGTTCTATGAGCCAAGATACAGCATCCACATAAGGGTGATAGACCACACCGATGCTACCTCTTTTGTTTTGTTCGATGGAGAAGCTGCAAAGTTTCTTGGAGTTTCTGCTAATGACCTTAGGCAGTCTTGTGTGACTAAGGGTGTTGAGAAAAATTCCTGTCCCGAAGAGATTAATAAGCTTAGGGTTATTAAGTTCATCTTCAAAGTGCAACTCAAGATGAGGAATCTGAACTCTTATGAACCATATGTGATTCATGTGCTGATAATGATTAATGAGAATTCTCTGGTCTCTGCTTTCCTGGATAAATATAATCCTGACCCTGTAACCCCCTTTGGCCTTTTGTCCCATGAAAATTCTGAACTATTGAGTTTGTCTACTGGTCCATACGACACTTCTAAGGCTTGTGAGAGTAAGCTAACTCCATCACCTGCAGTTGATGAGAAACATAATTCTAAGATTCTCGGAGCTAAGAAACATATTGAAGAGGTTGGAGAGGAGTCAGTTTCATCCAAATCCAAGAAAAGGAAGTGGGTTGTGATGGAGAACTAA 915 0.4087 MGVMGVFNTNYNSKLFINVEFPAARDFFARVNKLDPVDGQGIMSLVCDQPVSVEEDFLRLSVYKTIAEIKEHNQDAVSVTAGTIKEVEIEFGWWYKGCKKCRRGLREIEKRYFCPNCIRDYGFYEPRYSIHIRVIDHTDATSFVLFDGEAAKFLGVSANDLRQSCVTKGVEKNSCPEEINKLRVIKFIFKVQLKMRNLNSYEPYVIHVLIMINENSLVSAFLDKYNPDPVTPFGLLSHENSELLSLSTGPYDTSKACESKLTPSPAVDEKHNSKILGAKKHIEEVGEESVSSKSKKRKWVVMEN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2408 304 CDD RPA1_DBD_C 66 199 IPR013955 -
Ahy13g2408 304 SUPERFAMILY Nucleic acid-binding proteins 63 201 IPR012340 -
Ahy13g2408 304 Gene3D - 58 220 IPR012340 -
Ahy13g2408 304 Pfam Replication factor-A C terminal domain 81 199 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2408 Ahy-Chr13 55183850 55185587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2408 94 163 Core DNA Replication Machinery Family AT5G61000 35.211 1.53e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2408 - - adu:107477146 530.406