Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2404 ATGGAAGGTGAGCAGCAGCAAAGATCAAAACTGAATAAAGCTAAGCAGATTGTGAGGCTAAGGGGAATGCTTCGTAGATGGCACAGTTTCTCATCCTCATCGTCAACCTCAATCTCATCATCACCAAACATTTCAAGTAGCCCCAATTACAACATGATTGACAATTCTGATTACCAAGAACCTACAAGTGATGATGATCCAACCTCAAAGAGGGCAGCGTGTAATTGTAACTTGGATGAAGAGGATCACAAATGCGAGAGCCCCGAGCCCCCTCCCGATGTTCCGAAAGGGTACTTGGCAGTTTATGTTGGGAGTGAGCTTCGGAGATTCATCATTCCAACTAGCTACCTTACTCATTCTCTCTTCAAGTTATTGCTTGAGAAGGCTGAAGATGAGTTTGGATTTAGCCATAATGGTGCTCTCACTATTCCTTGTGAGACTGAGACCTTCAAGTATCTCCTCAGATGCATAGAGACCAACTACGACACCCATCAAGGTAGCTCCTCTGGAAATATAGGAACTTCGGAAGCATAA 534 0.4419 MEGEQQQRSKLNKAKQIVRLRGMLRRWHSFSSSSSTSISSSPNISSSPNYNMIDNSDYQEPTSDDDPTSKRAACNCNLDEEDHKCESPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHSLFKLLLEKAEDEFGFSHNGALTIPCETETFKYLLRCIETNYDTHQGSSSGNIGTSEA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2404 177 PANTHER AUXIN-INDUCED PROTEIN 15A 12 168 - -
Ahy13g2404 177 MobiDBLite consensus disorder prediction 28 73 - -
Ahy13g2404 177 Pfam Auxin responsive protein 78 157 IPR003676 GO:0009733
Ahy13g2404 177 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 168 IPR003676 GO:0009733
Ahy13g2404 177 MobiDBLite consensus disorder prediction 28 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2404 Ahy-Chr13 54963411 54967135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2404 4 176 Calmodulin-binding Proteins AT3G43120 47.486 2.27e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2404 K14488 - tcc:18588225 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2404 13 54963411 54967135 Ahy13g2404 13 54963411 54967135 ECH
Ahy13g2404 13 54963411 54967135 Ahy3g2159 3 65994341 65997476 hybridization