Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2397 ATGCAGACACAACTCAGGCGCACTATTTTCACTTTCCTGCTGTTGTTCTCATCCCCAACATTTTTCGTCTTCTCCACCGCATCACCACCGTCAAAAAACAACCGCAGCAACAACGCGCAAGCCCTGGTCCGTTCATCATGCGTTCACACAAGGTACCCGAGCATCTGCCTCAGAACACTCTCAAACTACGCTGGGCCTGCCAACTCCCCCTTAGACGTGGCCCGGGCCGCTCTCAGGGTGAGCCTGGCCCACGCCCGACGAGCCTGCAGACACCTCAAGACTCTCCAATCACCACTGGTAGGCCCAGGCCCAGGCCCAAATACAGGCCCATTGAGCTCGAAGTCCAAGAGGCAGCGAGCGGCGCTGAGTGACTGCATCGAGCAGATGGCGGACTCGGTTGACGAGCTGAAGAGGAGCCTTGAGGAGCTCCAGCACCTCGAAACGGCGACGTTTCGGTGGCAGATGAGTAACGCACAGACTTGGGTGAGTGCTGCCCTCAGTAACGGCGACTCATGCCTCGATGGCTTTGGAGACGTAAGCAACGGCGGCGATAGAGGCAGTGGAGGCAACGACCGTGACAAGAAGCTGAGGAGGAGCGTGAAGCGGAGGGTGACTGACGTGGCAAGGGTCACGAGCAATGCTTTGTACATGATTAACCTTGTTGGTGAAACTTGGCCCGGGAAGCCTAATAAGCATCGTTCTTCGCCACGTGGCACCCATTTCAATGACTGCGTTGAGCATCCTGCTTGTGCTTAA 756 0.5688 MQTQLRRTIFTFLLLFSSPTFFVFSTASPPSKNNRSNNAQALVRSSCVHTRYPSICLRTLSNYAGPANSPLDVARAALRVSLAHARRACRHLKTLQSPLVGPGPGPNTGPLSSKSKRQRAALSDCIEQMADSVDELKRSLEELQHLETATFRWQMSNAQTWVSAALSNGDSCLDGFGDVSNGGDRGSGGNDRDKKLRRSVKRRVTDVARVTSNALYMINLVGETWPGKPNKHRSSPRGTHFNDCVEHPACA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2397 251 TIGRFAM PME_inhib: pectinesterase inhibitor domain 114 219 IPR006501 GO:0004857
Ahy13g2397 251 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 221 IPR035513 -
Ahy13g2397 251 MobiDBLite consensus disorder prediction 177 200 - -
Ahy13g2397 251 CDD PMEI-like_3 45 219 - -
Ahy13g2397 251 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 221 IPR035513 -
Ahy13g2397 251 Pfam Plant invertase/pectin methylesterase inhibitor 42 216 IPR006501 GO:0004857
Ahy13g2397 251 Coils Coil 126 149 - -
Ahy13g2397 251 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 223 - -
Ahy13g2397 251 MobiDBLite consensus disorder prediction 94 118 - -
Ahy13g2397 251 PANTHER PECTINESTERASE INHIBITOR 3 20 223 - -
Ahy13g2397 251 SMART PMEI_2 38 217 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2397 Ahy-Chr13 54280873 54282085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2397 32 224 Carbohydrate Esterase AT3G14310 28.718 6.77e-19 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2397 13 54280873 54282085 Ahy13g2397 13 54280873 54282085 ECH