Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2395 ATGGACCACACAGGGCAACCAGATTCACAGTCGAATGGGTTTGTGGAGCCTAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCACAGGATGCTGATGATGGAATGAGCGGCGAAACCGTGCCGGTAGAGGAAGCAGAAGCGATGGATTCGTCCGCCGGAGATGCGGACATAGATGCAGAAGCAGTGGTGAGGATTGTTAACGGGATAGGGTCCTTTGGCGCCATTGAATTTTCTTCCTTGACAGCCAACGACGTCCTTACGACGGAGTTCACAAGCCTACAGGTAGCTCATGACTATTACAACGAATACGGTCGCATCAAGGAATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAAGGCGAAATCATTTGGCAGATATTCGTGTGCTCGAGGGAAGGAGAGCGAGATGGGAAACACATGCAGCAGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGTTGATAATGCCAGCGGGCGATGGTTTGTTGAACAATTCTGTGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTCGCAGTCACACAGAGTAGTCAAGGAAGGCGATTTGCACCAAATCAATTCCATGAGAAAATCTGGGTTGCGGGTGCCGACAATTTTCCGCGCCTTTGCCAATCAGTCAGGAGGATTCGAGACTGTCGGGTTCGAGATAAAGGACATATACAATGCGATAGAGAAGCAAAGGCGGGCTGGCGCGACAGATGCTGAGGCCAAGTACTCACTGAATGTTGACAAGAGGCTGGAAAATCTCTTCTGGTGCGATGGTACAAGTCGTTATGACTACAACGTGTTTGGGGATGTCCTGGGTTTTGATGCAACGTACAGTCGTAACAAATACAAGTGCCCTTTGGTAATATTCTCAAGGGTGGACCATCATATGAGGACAGCGGTGTTCGGCTGCGCCATCTTGAGCAAGGAGAGCGAAGGAAGCTATGTGTGGTTGTTGCGGTCATTTCTTGAGGTAATGAAAGGAAAACAGCCGAAGTCTGTCATCACGGACGGGGACCTCGCCATGAAGAGTGCGGTTAGCATAGTTTTTCCCGGTGCACATCACAGGTTGTGTAGCTGGCATTTGTTAAGGAACGCCACTGCTAGAGTTGGACGGCCGGGTTTTCTTTGGAAATTTCGTCTATGCCTGATGGGACATCTAGAGGTTGACGAATTTGAGAGAATATGGACGGATAGCGTGGCAGACCACAGGTTGGAGGATCATCCGTGGATAGTGGATATGTATGCAAAGAAACATTCATGGTCTAATGGACATATCTGGGGGAAATTCTTCACAGGACTGAAGACGACATCGAGGTGCGAGGCTTTGAATATGCAGCTTGGAAAATTTATACACAACGGGTACAATCTGAGGGAGTTCGTGGAGCATTTCCAACACTATTTGGAATTCATGAGGAGGAGAGAACTAGTGGCAGACTACAAGTCTGCATACGGCGAGCCTGCAGTAAAAACGAAACTCGAGGCCATTGAGCAGTTCGCTGCGACGGTTTATACAAAAGAGGTTTTTGAACTGTTTTGGGAGGTGCTGATTCTAGCCAGCAATGTTAGAGTTGTGTCCACCAAGAGGACGAGCGCTTGTGTTTTGTTCGAGGTCACAATGTACTGCAAGCAGAGATCATGGGCCGTGTCGTGGGCCGAGGAAGACGTCGAATTCAGTTGTTCTTGTCAGCGGATGGAGTCCTTCGGGCTTCCTTATGTCCACATGGTTGGGGTTCTGGTTTATCTGAACATGACAGCTATTCCCAGAAGCCTAATACTTGAACGGTGGACAAAGAGGGCAAAGTAG 1887 0.4955 MDHTGQPDSQSNGFVEPSYEFSSNFDRVHASQDADDGMSGETVPVEEAEAMDSSAGDADIDAEAVVRIVNGIGSFGAIEFSSLTANDVLTTEFTSLQVAHDYYNEYGRIKEFSVRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQQEDRKMDPRPITRCGCEARIKVHVDNASGRWFVEQFCDNHNHPMLDARFRGLSQSHRVVKEGDLHQINSMRKSGLRVPTIFRAFANQSGGFETVGFEIKDIYNAIEKQRRAGATDAEAKYSLNVDKRLENLFWCDGTSRYDYNVFGDVLGFDATYSRNKYKCPLVIFSRVDHHMRTAVFGCAILSKESEGSYVWLLRSFLEVMKGKQPKSVITDGDLAMKSAVSIVFPGAHHRLCSWHLLRNATARVGRPGFLWKFRLCLMGHLEVDEFERIWTDSVADHRLEDHPWIVDMYAKKHSWSNGHIWGKFFTGLKTTSRCEALNMQLGKFIHNGYNLREFVEHFQHYLEFMRRRELVADYKSAYGEPAVKTKLEAIEQFAATVYTKEVFELFWEVLILASNVRVVSTKRTSACVLFEVTMYCKQRSWAVSWAEEDVEFSCSCQRMESFGLPYVHMVGVLVYLNMTAIPRSLILERWTKRAK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2395 628 Pfam FAR1 DNA-binding domain 101 195 IPR004330 -
Ahy13g2395 628 ProSiteProfiles Zinc finger SWIM-type profile. 563 610 IPR007527 GO:0008270
Ahy13g2395 628 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 628 IPR031052 GO:0006355
Ahy13g2395 628 PANTHER OS02G0262500 PROTEIN 87 628 - -
Ahy13g2395 628 Pfam MULE transposase domain 298 392 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2395 Ahy-Chr13 54209149 54211517 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2395 FAR1 8.50E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2395 - - aip:107633138 1292.72