Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2389 ATGGAAGTGAAACCCATAGCTTTGAAGTTACTAGTCCTTACTGTAGCATTTCTGGCTCTTCTTCTTGGACTTTCCTCCAGTGCAGCACTTAATGAGACTTGCGGTTCGCTCAATCGAGATACTGAAGCACCATGCCCAACTGGTTGGGTTATAGATCCTAATAAGACCAAGTGTTTTCTCCATGTTGGGAGGCCTCAATCTTGGAATGATTCAGAGACCTGTTGCAATAAGTATGGTGGCCATTTAGCATCACTGGTATCGGTTCAGGAGCTACAATTTGCTCAGAGTCTATGCGGTGAATATATAAATAATTGCTGGATTGGTGGAAGAAATCTCAATTCTACAACTGGTTACCAATGGATGTGGTCTGACAATTCTCAATGGAATCAGTCCCTTTTTCCCTTGACTGATGTTCCAACCAACTGTAAACCATCTTGTCGTGTGAATAGAACGAATGATTTGTGTGCATTAATGACTAACAACTCAAAATCTCTCTCGAGTGAGAGATGCGATAATCCTCATTCTTTTGTATGTGTACTTGATATAGGTAGGAAATGTAACCATATGCATTGCCACAGGGAATACCTTATCATCCTTTCAGTTGTGAGTGCATTGATACTCTCGATAACATTAGCCGTGGTGGTTTGGCTCCTTGTATATAAACAGGGAAAGAAAAGAAGGCGGTCTAGAAAGCTATCTGACCCAGCAGCTTCTCTTCCATCATGGAAAGTTTTTACCAAAGATGAATTAAGGTCTATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGGGATGCCAAGACAGGTGGTACATACAGTGGGGTCCTACCAGATGGCTCAAAGGTTGCAGTTAAGAGATTAAAGAGGTCAAGCTTCCAACGTAAAAAGGAATTCTATTCAGAGATTGGCAGAGTTGCAAGGCTCCACCATTCAAATCTAGTAGCTGTGATGGGGTGCTGCTATGATCATGGTGATCGATATATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGCTACATCACATACCAAGAGGTGGCCGTAGCTTAGACTGGGCTATGAGGATGAAAATTGCCACGACGCTTGCGCAAGGGATTGCGTTTTTGCATGACAAGGTTAAGCCACAAGTTGTGCATCGAGATATACGAGCTAGTAATGTACTGCTAGACGAGGAGTTCGGAGCACACCTAATGGGAGTTGGCCTATCAAAGTTTGTACCATATGAAGCAATGCATGAGCGGGAGCGGACCGTGATGGCAGGGGGAACACACGGATATCTTGCTCCAGAGTTTGTGTACCGAAACGAGCTAACAACAAAGAGTGATGTCTATAGTTTTGGTGTCCTACTACTCGAAATAGTCACCGGGCGCCGACCTGCACAACCAGTTGATTCCATGGGTTGGCAGAGTATATTTGAATGGGCGACGCCCCTCGTGCAAGCAAATCGCTACCCTGAACTCTTGGATCCTCATATATCATCATCATCTTCAAGTATCATTCCAGAGGCTAGCACCATTCAGAAGGTGGTGGACCTTGTCTATTCTTGCACACAGCATGTCCCATCTATGCGCCCTAGAATGTCTCACGTTGTTCTTCAGTTACAACAGTTCTCCCAACCACCTGCAAAGTAA 1641 0.44 MEVKPIALKLLVLTVAFLALLLGLSSSAALNETCGSLNRDTEAPCPTGWVIDPNKTKCFLHVGRPQSWNDSETCCNKYGGHLASLVSVQELQFAQSLCGEYINNCWIGGRNLNSTTGYQWMWSDNSQWNQSLFPLTDVPTNCKPSCRVNRTNDLCALMTNNSKSLSSERCDNPHSFVCVLDIGRKCNHMHCHREYLIILSVVSALILSITLAVVVWLLVYKQGKKRRRSRKLSDPAASLPSWKVFTKDELRSITKNFSEGNRLVGDAKTGGTYSGVLPDGSKVAVKRLKRSSFQRKKEFYSEIGRVARLHHSNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMHERERTVMAGGTHGYLAPEFVYRNELTTKSDVYSFGVLLLEIVTGRRPAQPVDSMGWQSIFEWATPLVQANRYPELLDPHISSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVLQLQQFSQPPAK* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2389 546 PANTHER - 1 542 - -
Ahy13g2389 546 ProSiteProfiles Protein kinase domain profile. 258 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2389 546 Pfam Lectin C-type domain 65 179 IPR001304 -
Ahy13g2389 546 Pfam Protein tyrosine and serine/threonine kinase 273 537 IPR001245 GO:0004672|GO:0006468
Ahy13g2389 546 SUPERFAMILY Protein kinase-like (PK-like) 231 537 IPR011009 -
Ahy13g2389 546 CDD CLECT 57 178 - -
Ahy13g2389 546 SMART tyrkin_6 270 537 IPR020635 GO:0004713|GO:0006468
Ahy13g2389 546 Gene3D Phosphorylase Kinase; domain 1 233 333 - -
Ahy13g2389 546 Gene3D - 24 181 IPR016186 -
Ahy13g2389 546 ProSiteProfiles C-type lectin domain profile. 54 179 IPR001304 -
Ahy13g2389 546 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 542 - -
Ahy13g2389 546 SUPERFAMILY C-type lectin-like 30 181 IPR016187 -
Ahy13g2389 546 ProSitePatterns Tyrosine protein kinases specific active-site signature. 380 392 IPR008266 GO:0004672|GO:0006468
Ahy13g2389 546 Gene3D Transferase(Phosphotransferase) domain 1 334 545 - -
Ahy13g2389 546 SMART CLECT_2 45 179 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2389 Ahy-Chr13 54106836 54110620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2389 75 543 Receptor kinase-like Gene Family AT1G52310 69.295 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Ahy13g2389 PK_Tyr_Ser-Thr 9.10E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2389 - - gmx:100779497 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2389 13 54106836 54110620 Ahy3g2098 3 52096111 52099944 hybridization