Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2378 ATGCAACTTCCGTTTACAGATGAGGAAGCTGTTTATCGATTCTATAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTTTAGAAAGGAAGAGGTTGAGGGACCACCGACCCTAACTCGAAGTTGTTGCCGGGTGAGAATTCGTGCAAGACTAGATACAAAAATTCAGAAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATTGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTACACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGTAGACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAATGAAAAGGTGAAGGGTGGTGATGCAAATGCTGCAATAAGCTACCTGAGAGGTAAAGTTGGGAATGAATCTTATTTCTTTGGCAAGTTCACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTGATGGGACTAGCCATATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGGAATGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACTGTCATATTTGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACATTTTTTGGAAGCAATGGGGAGAATGCATGCGAGAAGGTTAAGAACAGTGGATTTCTAAACGACTTCAAGAAATTGATTTATGCCAATGTGAGTGTTGAAGAGTTTCAGGTCATGTGGACAACATCCCACTGTGAAGGGATTAACTCTCTAATAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCATAATATGTTCCGGGAGGTCAGAAAGGAAATTGAGGGTGCTTGTGCAATGACTTCAAGTGTAACAGTTTTGGAGTGCTAA 1212 0.4092 MQLPFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNRAGFRKEEVEGPPTLTRSCCRVRIRARLDTKIQKWKVVSFYEEHSHELVAPLDVSMMPEYCTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKGGYVDLSFNQKDMYNLITQHRNEKVKGGDANAAISYLRGKVGNESYFFGKFTLSNENRLENLFWADGTSHIDYECFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVIFGCGLLVNEDIGSYKWLLETFFGSNGENACEKVKNSGFLNDFKKLIYANVSVEEFQVMWTTSHCEGINSLIKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLPTLEDFAAKTFTHNMFREVRKEIEGACAMTSSVTVLEC* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2378 403 PANTHER OS02G0262500 PROTEIN 5 271 - -
Ahy13g2378 403 Pfam MULE transposase domain 218 295 IPR018289 -
Ahy13g2378 403 Pfam FAR1 DNA-binding domain 13 96 IPR004330 -
Ahy13g2378 403 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 271 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2378 Ahy-Chr13 52634754 52636191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2378 MULE 3.40E-12 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2378 - - aip:107633076 828.165