Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2374 ATGGATCCTAGACCAGTAACGCGATGTGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCAAGGAACGGGAGATGGTACGTTGAGTTCTTCTCGGATGAACATAACCATGAAATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCCAGCGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGTCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCACAATATTTTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTATGGGAGGAATAAGTACAAATGTCCCCTTGTGATATTCTCTGGCGTGGATCACCACATGCGCACTGTTGTGTTTGGATGTGCGGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGTGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCGCTCGAGTAGGTATTCCACGGTTCATGACCAAGTTTCGTCTTTGTTTAATGGGGGATTTGGAGGTCGATGACTTTGAAAATATATGGAATGATGCAGTTGAAGAATTTGGGTTGCAACAGAATTCATGGGTCAAGGATATGTATGAAAAGAAACATATGTGGTCAAATGCCCACATTAGGGGCAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGTGTGAGGCGCTAAATATGCAAATAGGCAAGTTTATACACAACGGCTACAACTTGAGGGAATTTATTGAGCATTTTTAA 1062 0.4426 MDPRPVTRCGCNARIKVHVDSRNGRWYVEFFSDEHNHEMLEARFRGMMRSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQSGGFEMVGFQVKDIYNAIEKQRRAGASDTDNALKYLQMLKSRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCPLVIFSGVDHHMRTVVFGCAVLSKEGEESYVWLLRAFLEAMKGKAPKSVITDGDQAMKSAIKAVFPEAHHRLCSWHLLRNATARVGIPRFMTKFRLCLMGDLEVDDFENIWNDAVEEFGLQQNSWVKDMYEKKHMWSNAHIRGKFFAGLKTTSRCEALNMQIGKFIHNGYNLREFIEHF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2374 353 Pfam MULE transposase domain 160 254 IPR018289 -
Ahy13g2374 353 PANTHER OS02G0262500 PROTEIN 2 341 - -
Ahy13g2374 353 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Ahy13g2374 353 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 341 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2374 Ahy-Chr13 52566662 52567723 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2374 MULE 5.70E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2374 - - ahf:112803492 725.317