Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2369 ATGGTCATGGCCCTATCCATTTCCTCCACTGCATTATCAAGTCTTCCAAGCAGAGAGATACGGCAAAAGGTTGTTCATCATGAAAGAACAACGACGTTGTTTCCAAGAACAATTCTAACAAATGCAACAAAAGGAGTGTCAAGTGTGTGTGAACCACTTCCTCCAGATAGACCATTGTGGTTTCCTGGTAGTTCCCCTCCTCAGTGGCTTGATGGCAGTCTTCCTGGTGATTTTGGTTTTGACCCACTTGGATTAGGGTCGGATCCAGAGTTGTTGAAATGGTTTGCACAGGCAGAGCTAATGCACGCAAGATGGGCAATGCTTGGTGTATCAGGAATCCTGATCCCAGACCTTCTTCAAAAAATGGGCTTCCTTCACAACTTCTCTTGGTACGACGCCGCAACAAGGGAATATTTTGCGGACCCAACAACCCTCTTCATTGTCCAGATGGCCTTGATGGGCTGGGTTGAGGGTAGGAGATGGGCCGACATGCTCAACCCAGGCTCCGTTGACATTGACCTCAAGCTGCCACACATAACAAAGCCCAAGCCCGATGTTGGGTACCCCGGTGGGTTTTGGTTTGACCCAATGATGTGGGGGAGAGGCTCCCCTGAGCCCGTTATGGTCCTCAGGACTAAGGAGATCAAGAATGGTAGGCTTGCCATGCTTGCATTTGTTGGGTTTTGGTTCCAGGCTATTTATACCGGGGAAGGCCCTATTGATAACTTGATGGCTCATATCGCTGACCCCGGTCACTGCAACATTTTCTCGGCTTTCACGTCGCATTAG 789 0.493 MVMALSISSTALSSLPSREIRQKVVHHERTTTLFPRTILTNATKGVSSVCEPLPPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPDLLQKMGFLHNFSWYDAATREYFADPTTLFIVQMALMGWVEGRRWADMLNPGSVDIDLKLPHITKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTSH* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2369 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 259 IPR001344 GO:0009765|GO:0016020
Ahy13g2369 262 SUPERFAMILY Chlorophyll a-b binding protein 56 261 - -
Ahy13g2369 262 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Ahy13g2369 262 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
Ahy13g2369 262 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2369 Ahy-Chr13 52009590 52014675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2369 55 260 Chloroplast and Mitochondria Gene Families AT3G61470 66.990 5.15e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2369 K08908 - gmx:100812066 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2369 13 52009590 52014675 Ahy13g2369 13 52009590 52014675 ECH
Ahy13g2369 13 52009590 52014675 Ahy3g2077 3 50395851 50400772 hybridization