Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2368 ATGGCCGCTGTTCGCTCTAACAACCACAACCGCCGCAGTCACGTTTTCTGCGTGTTCTTGTTCATTGCTGTCTCTCTCTACAGCCTCCCACTGTCTCTCTCAGGCGACGCGGAGTCCCTTCAAAAGCTGAAACAATCCTTCACCAACGGCGATCGCTTGCTGTACACGTGGGAACCCAACACGTCACCTTGCGAAAACTGGATGGGCCTGGTGTGCGCCGACGGCATGGTAATGGGCATTCGCCTCTCCGACATGGGCTTGTCTGGTACCATCAACATAGACGCTCTTGCCGAGATCCCCGGGCTCAGGACCCTAAGCTTCACCAACAACAGCTTCACGGGCCCAATCCCTGACTTCAGCAGGCTCGGCGCCATCAAAGTCCTCTTGCTCTCCTACAACCAATTCTCCGGGCCCATCCCTTCCGATTTCTTCTCCAAATTGACTTCCCTAAAGAAAGTTTGGATCGACTCGAATAGCTTCTCCGGCCAGATACCCGAATCTTTGATGGAGCTAGCGCTTCTCAAAGAGCTTCACATCGAGAACAACCACTTCACCGGAAGGATACCCGCTGTGAAGGAAGATTTGACCTCGTTCAACGCGTCCTACAACAACCTCGAAGGTCCTATACCGGAAGCGCTGGCTAGGTTCGGTGAGAATGCGTTTGCTGGTAGCGGGAACGAGAAGCTTTGCGGGAAGCCGTTGAGGAGAAGCTGCGATAGTAGTGGCTTGCCTTCCTCGTCTTCGTACACGTTACCACCGCTTGATAAGAATCAAGGGTCAGGGTCAGGGTCAGGGTGGGGCATGAAGATTATCCTGTTTCTGTTCTTGGCTGCAGTGGCAGCGCTTGTGTTCGTGTTCGTAAAGGCGCGGCGGAGGAACGATGAGTTCGGGTTGATGGGGAGAATAAACAGTGTGGATTCGATGGTGGACATTCACGTGGCGAGTACGAACGGCTACAGGGCGCCGGAGGGAGAGGGGTCGGTGGGGATGGCGAAGAGAGGGGATTCGAACAAAGGAGGGGCGCGGGGGAAGGGAGGGGGAATGGGGGACCTTGTAATGGTGAACGACGAGAGAGGGGTGTTTGGGCTGCAGGATTTGATGAAGGCGTCGGCGGAGGTGCTTGGGAACGGGGGGCTGGGATCGGCGTACAAGGAGGCGATGACGAACGGGCTGTCGGTGGTGGTGAAGAGGATGAGGGATATGAACAAAATGGGAAGGGATGTGTTTGACGCTGAGATGAGGCAGTTTGGGAGGATGAGGCATAAGAATATATTGGGGCCTTTGGCTTACCATTACCGTCGGGAGGAGAAGCTCTTCGTTACTGAGTATATGCCCAAAGGCAGCTTGCTTTATGTCTTGCATGGTGACAGAGGAACAGCCCATGCAGAGTTGAACTGGCCGACCAGGTTAAAGATTGTGAAGGGAATAGCAAGAGGGTTGTCATACCTCTACACTCAATTTTCCACCTATGACCTTCCCCATGGAAACCTCAAGTCCAGCAATGTCCTCCTCAGTGATGACTATGAGCCTCTCTTAGGTGACTTCGGATTCCACCCACTCATCAACCCCACGGCCGCCGTTCAAGCCATGTTCGCCTACAAATCCCCTGACTATATCCAGTACCAAAAGGTCTCCCAGAAGACCGACGTCTTCTGCCTCGGAGTCCTCATCCTCGAGATCATTACCGGCAAGTTCCCTTCCCAGTATCATAGCAATGGAAAGGGTGGCACCGATGTTGTTCAACGGGTATTCACGGCGATTTCCGAGTCCAGGGAAGCAGAACTCATCGATCCAGAGTTGCAAGGGAACATGGGATCGCAAACTCAGATGTTGCAGCTTATCCACATTGGTGCTGATTGCACCGAGAGCAATCCTGACAAAAGACTTGCCATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTGTAA 1932 0.5347 MAAVRSNNHNRRSHVFCVFLFIAVSLYSLPLSLSGDAESLQKLKQSFTNGDRLLYTWEPNTSPCENWMGLVCADGMVMGIRLSDMGLSGTINIDALAEIPGLRTLSFTNNSFTGPIPDFSRLGAIKVLLLSYNQFSGPIPSDFFSKLTSLKKVWIDSNSFSGQIPESLMELALLKELHIENNHFTGRIPAVKEDLTSFNASYNNLEGPIPEALARFGENAFAGSGNEKLCGKPLRRSCDSSGLPSSSSYTLPPLDKNQGSGSGSGWGMKIILFLFLAAVAALVFVFVKARRRNDEFGLMGRINSVDSMVDIHVASTNGYRAPEGEGSVGMAKRGDSNKGGARGKGGGMGDLVMVNDERGVFGLQDLMKASAEVLGNGGLGSAYKEAMTNGLSVVVKRMRDMNKMGRDVFDAEMRQFGRMRHKNILGPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTAHAELNWPTRLKIVKGIARGLSYLYTQFSTYDLPHGNLKSSNVLLSDDYEPLLGDFGFHPLINPTAAVQAMFAYKSPDYIQYQKVSQKTDVFCLGVLILEIITGKFPSQYHSNGKGGTDVVQRVFTAISESREAELIDPELQGNMGSQTQMLQLIHIGADCTESNPDKRLAMKEAIRRIEEVQV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2368 643 SUPERFAMILY Protein kinase-like (PK-like) 372 638 IPR011009 -
Ahy13g2368 643 Gene3D Phosphorylase Kinase; domain 1 374 444 - -
Ahy13g2368 643 SUPERFAMILY L domain-like 35 216 - -
Ahy13g2368 643 ProSiteProfiles Protein kinase domain profile. 368 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2368 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 643 - -
Ahy13g2368 643 Pfam Protein kinase domain 372 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2368 643 Gene3D Ribonuclease Inhibitor 145 239 IPR032675 -
Ahy13g2368 643 PANTHER LRR RECEPTOR-LIKE KINASE 13 643 - -
Ahy13g2368 643 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Ahy13g2368 643 Gene3D Transferase(Phosphotransferase) domain 1 445 643 - -
Ahy13g2368 643 MobiDBLite consensus disorder prediction 322 344 - -
Ahy13g2368 643 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Ahy13g2368 643 Coils Coil 641 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2368 Ahy-Chr13 51967173 51969593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2368 15 643 Receptor kinase-like Gene Family AT3G42880 48.228 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy13g2368 Pkinase 7.30E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2368 - - ahf:112738359 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2368 13 51967173 51969593 Ahy13g2368 13 51967173 51969593 ECH
Ahy13g2368 13 51967173 51969593 Ahy3g2076 3 50049331 50052062 hybridization
Ahy1g1762 1 93899066 93900916 Ahy13g2368 13 51967173 51969593 PCT
Ahy13g2368 13 51967173 51969593 Ahy1g1762 1 93899066 93900916 PCT