Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2345 ATGGATTTGCGTTTTGAGAAAATCACTCCGTGGAGAGAATCATGGGAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAGAATCCTGCTTTGGATCCTTCTCAAAATCTATTGCATATGGTGTTAATGGATGAGAAGTTACAAAAGATCCAAGCAACCATTAGAGATCAGCTTATACCAAAATTTGTTGTGTCTCTAACTGAAGGAGAGGTGTACTTGATGACCCATTTTACGGTTGTACCAAACACTGGTTTGAACAGAGTGGCAAAACATAGGTTCAGACTTTTGTTCCAATATAAGACCTCTTTTGTTTCTGTGGTATCTGTAAGGATACCACATTCGGGTTTGTGTTTTACATCAATAGATGAAATTAATCAAAGGAAGGACGACGATTTACTCATTGATTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGCAAGATGATCAAAGCAGTTGTGCTCGAAGTTTTTTCTGATGGCAAAAAGGAACAATGCAATGTGTTTGGAAATGCTTGTGATCTGTTGGAATATGATAACTTACAAAAATATCCAAGATCTCCACTGATTGTTCTCGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGGATAATCCTGCAGAATGTGATGAATGTCTCTAGGTTATTCATTAATCCTGACATTCCTGAGTCTGTTGAGTTCTTGAGCAGATTTAGTGTTGCCAGTTATGGATTCTGA 738 0.374 MDLRFEKITPWRESWEVHVKVVKLWYHKNPALDPSQNLLHMVLMDEKLQKIQATIRDQLIPKFVVSLTEGEVYLMTHFTVVPNTGLNRVAKHRFRLLFQYKTSFVSVVSVRIPHSGLCFTSIDEINQRKDDDLLIDFVGIITGVRKERDVASYGKMIKAVVLEVFSDGKKEQCNVFGNACDLLEYDNLQKYPRSPLIVLESFKIKAIEGGIILQNVMNVSRLFINPDIPESVEFLSRFSVASYGF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2345 245 SUPERFAMILY Nucleic acid-binding proteins 5 106 IPR012340 -
Ahy13g2345 245 SUPERFAMILY Nucleic acid-binding proteins 119 240 IPR012340 -
Ahy13g2345 245 Pfam Domain of unknown function DUF223 41 125 IPR003871 -
Ahy13g2345 245 CDD RPA1_DBD_A_like 17 104 - -
Ahy13g2345 245 Gene3D - 111 243 IPR012340 -
Ahy13g2345 245 Gene3D - 3 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2345 Ahy-Chr13 50601987 50606726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2345 8 238 Core DNA Replication Machinery Family AT5G08020 21.912 8.56e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2345 - - ahf:112738343 481.1