Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2336 ATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATACCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGCAGGGCCGACTACTCATTATTTGGCGATGTGCTGGCGTTTGATGCTACCTATAAGAGGAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATACAGGTGGTTGCTACAACAACTGAAGGTAGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAACGCAACAAGTAACATTGGCAAGCCCCAGTTTACATCCATGTTTAAAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGAGATTTGGTGTCGAAAACAAGAATTGGGTCCTAGATATGTATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCATTATGCAAACCTGTTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGGTTTGGACCAAACGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACGTAGTTTGCATCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTGGGTTTGCAAAATGCGGTTGGGCTTCATTGGGATTCTTTGATGCTAAGTCAGTACGGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCTGCACAAAAAGGGGGGGGTCAATGA 1989 0.4233 MDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQRDMYNKIAKQRRQLPGDAYAALKYLEDQATNDPSLYFNHHMDTDGTLRNLFWCDGLSRADYSLFGDVLAFDATYKRNKYMCPLVVFSGVNHHNQTIIFAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCAWHLIRNATSNIGKPQFTSMFKKCMLGDYEIDVFRQKWFEMVERFGVENKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIRWKEVQADLASVNGRPIMQTCFQQLERSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVGLDQTPNEMWRVFCCDIEMEFNCSCMRMESFGIPCEHVVCILVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYGCLMDWFRQLANFACRDNERFIFTREMAMNLLKQFKEEDAAQKGGGQ* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2336 662 Pfam MULE transposase domain 265 359 IPR018289 -
Ahy13g2336 662 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 602 IPR031052 GO:0006355
Ahy13g2336 662 ProSiteProfiles Zinc finger SWIM-type profile. 530 578 IPR007527 GO:0008270
Ahy13g2336 662 PANTHER OS02G0262500 PROTEIN 43 602 - -
Ahy13g2336 662 Pfam FAR1 DNA-binding domain 55 145 IPR004330 -
Ahy13g2336 662 SMART 26again6 553 580 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2336 Ahy-Chr13 50159346 50161334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2336 MULE 5.90E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2336 - - ahf:112723376 1377.84