Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2307 ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCATATATGAATTTACTGAGGGAGCATTTTTTTCTGAATCTGATATGTCAGAAGATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTAATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGCAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGTCCAAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGATGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTACCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGAGATTAGCACCTCACAGATATTTAGTCTTCTAGCTAGTCAAGCAGGCAGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCAGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGGTTTGTTACGTAATTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGATACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTCAGCGGGATTAACCACCACAACCAAACAATTGTTTTTGCTGCTGCGTTAATTGTAGACGAAACTACTGATACATATATTTAG 1071 0.3884 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFIYEFTEGAFFSESDMSEDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFNFYMKYSKSKGFSARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTMEKRQKEPRLETRTGCEVQMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPTHRKMSEADIMQMMNMLKSEISTSQIFSLLASQAGRYEFVGYGPRDMYNEIAQQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLRNLFWSDGISQLDYRLFGDVIAFDDTYKKNKYSCPLVIFSGINHHNQTIVFAAALIVDETTDTYI* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2307 356 PANTHER OS02G0262500 PROTEIN 88 355 - -
Ahy13g2307 356 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Ahy13g2307 356 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 355 IPR031052 GO:0006355
Ahy13g2307 356 Pfam MULE transposase domain 311 355 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2307 Ahy-Chr13 48229089 48230159 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2307 FAR1 5.70E-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2307 - - aip:107633123 724.931