Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2282 ATGGAGGAAATTACTTCGACGATTGCAGTGCCATACAGACTTGGGAATTTGATTCAGAAGGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGCTCATGGCAAACACAACAGCTTTGATATTAAATCCTACAATTGAAGCTCATCATCAATCTTACTCTGTTGGAAACGAAGACTACTGCACAGATATATGTCCAAAACACCAAACTAGGTCATCTGCAGAGGTAAAGGAGAATCAGGGTCGAACCAACTCAGCTCCCCTTGAATCAGAAATGGTTACTGAATTTAAGGTGAAAGATGAATTCATGTCAGCTAACAGTTTTCATTCTGTACATAATCAAAGATCTGAATCTGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACTGATAATTGTTCTGATTCTGATAATGATTTGCTAATTGCCACCAAGTTTAATAGTAATATCCAAGGAAAGTCCAGTTCGATCGAGGCGAGTGCAGAGCTGGAGCCAATGCAGAACATGGTTTCTGCTGCTATGGAACTTGAAACTGAAGATGGAAGCGGATCAGATGGATTTGATCCAAAACTATCTGCCAGTCTCCATGATGTGTCAGACAAGCAAACAAGCATAGCAGACTTCCAGAATGCATCGGAATCTGATGGAGGTCCTCGTTGGGGTTTCTCATCAGTTTGTGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCACGTTAATGAAAATGGAAACTCATCAGCCCACTTTTTCGGTGTCTATGATGGACATGGGGGTTGTCAGGTTGCGAATTACTGCCGGGAACATCTTCATTCAGTGTTGACTGAGGAGATAGAAGCTGCAAAATCTAGTTTAAACAATGCCAGGGAGAAGTGGCAAGAACATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTTGGACGAATCGGGGCACCGGATAGTGAAAGCCATTGTGATGGATCTGAGGGTAGTATTGAACCCCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTCTAACTCAAACCTACATTATAGTCGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGAAAAGAAGCCATGCCTTTGTCTACTGACCACAAACCTAATAGAGAAGATGAATGGGAAAGGATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTATTCGAAGACAGAAAACCGACGAGTGCCTTATTCTCGCCAGTGACGGTCTATGGGATGTCATCACAAACGAAGAAGCCTGCGCCATTGCGCGAAAACGAATCCTCCTTTGGCATAAGAAGAATGGCAGCAACAACAACAACAATATCAGTGTATCAACAGAACATGGCCATGGCATTGATCCTGCAGCTCATTATGCTGCAGAATGTCTATCTAAACTCGCCATCCAAAGGGGAAGCAAAGATAATGTCTCAGTCATTGTTATAGACCTAAAGGCCCAAAGAAAATTGAAGAAGAAAGCATAG 1656 0.4318 MEEITSTIAVPYRLGNLIQKESTVATRMEITGLKLMANTTALILNPTIEAHHQSYSVGNEDYCTDICPKHQTRSSAEVKENQGRTNSAPLESEMVTEFKVKDEFMSANSFHSVHNQRSESVASDKSCPGNEAATLTDNCSDSDNDLLIATKFNSNIQGKSSSIEASAELEPMQNMVSAAMELETEDGSGSDGFDPKLSASLHDVSDKQTSIADFQNASESDGGPRWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFGVYDGHGGCQVANYCREHLHSVLTEEIEAAKSSLNNAREKWQEHWKKAFSNCFHKVDDAVGRIGAPDSESHCDGSEGSIEPLTPETAGSTAVVAILTQTYIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVMFIRRQKTDECLILASDGLWDVITNEEACAIARKRILLWHKKNGSNNNNNISVSTEHGHGIDPAAHYAAECLSKLAIQRGSKDNVSVIVIDLKAQRKLKKKA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2282 551 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 143 550 - -
Ahy13g2282 551 CDD PP2Cc 225 541 IPR001932 -
Ahy13g2282 551 SMART PP2C_4 215 539 IPR001932 -
Ahy13g2282 551 ProSitePatterns PPM-type phosphatase domain signature. 271 279 IPR000222 GO:0043169
Ahy13g2282 551 ProSiteProfiles PPM-type phosphatase domain profile. 225 541 IPR001932 -
Ahy13g2282 551 Pfam Protein phosphatase 2C 227 534 IPR001932 -
Ahy13g2282 551 PANTHER ALPHABET, ISOFORM E-RELATED 143 550 - -
Ahy13g2282 551 Coils Coil 292 312 - -
Ahy13g2282 551 Gene3D - 214 551 IPR036457 -
Ahy13g2282 551 SUPERFAMILY PP2C-like 224 542 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2282 Ahy-Chr13 47110623 47114232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2282 224 550 PP2C-type Phosphatase Gene Family AT4G26080 59.633 1.97e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2282 K14497 - gmx:100812974 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2282 13 47110623 47114232 Ahy3g2005 3 44316710 44320304 hybridization
Ahy11g3136 11 149019600 149022885 Ahy13g2282 13 47110623 47114232 PCT
Ahy1g1816 1 94393603 94396871 Ahy13g2282 13 47110623 47114232 PCT
Ahy13g2282 13 47110623 47114232 Ahy11g3136 11 149019600 149022885 PCT
Ahy13g2282 13 47110623 47114232 Ahy1g1816 1 94393603 94396871 PCT