Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2275 ATGGAACCTCGCGTTGCGAATAAGTTTCGTCTTGGCAGGAAGATCGGTGCCGGTTCTTTTGGCGAGATTTATTTAGGTACTAATGTTCAAACTAACGAGGAAGTTGCAATTAAGCTTGAAAATGTCAACACAAGACATCCTCAGTTGCTGTATGAGTCCAAGTTGTACAGGATTCTCCAGGGAGGAACTGGTATTCCTAATATCAAATGGTTTGGAGTAGAGGGAGAATACAATGTTCTAGTGATGGATCTCCTTGGACCTAGTCTAGAAGATCTATTCAACTTCTGTAGTAGAAAGCTCTCGCTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTTATTCATTCTAAATCATTTCTACATCGGGATCTCAAACCAGATAATTTCCTCATGGGATTGGGAAGGCGGGCTAACCAGGTTTACTGTATTGATTTTGGATTGGCAAAGAAATATAGAGATAGTACAACTCACCAACACATTCCTTACAGGGAAAACAAGAATTTGACCGGAACGGCAAGATATGCGAGCATGAATACTCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAATCACTTGGTTTTGTCTTGATGTACTTCCTGAGAGGAAGTCTCCCTTGGCAAGGACTTAGAGCGGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAAGTCACTACCTCAATAGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCTTTAAGGTTTGATGATAGGCCAGATTATGCTTACCTGAAGAGAATATTCCGTGACCTGTTTATTCGTGAAGGATTTCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAACTAGCCACTCCACCAGCGCGTGCTTCTGCTCCTAATGCTGGAACTAGTTCTGGGATGCCTCCGCCTATGACCAGCGCTGCTGATAGGCAGACAGGAGGGGAAGAAGGAAGACCACCTGGCCTGGTTTCTGTGGATTCAAGGCGAATAATATCAGGGCCCATTTTAAATTCAGTAACTTCTTTAAAGCAGAAAAATGCGGTCATCCCTGATTCTGCTGTTAGTAAGGATGCTATGTTATCTAGCACCAATATCTTGGGCCAGTCAAGTGGATCAAGGCGAGTTGCTGCTGGCAGCCGTGAGACTTTTGCTGGTGTCGAATTGGATCCTCGTACGCGTATGGCAGAGGCTAGCCCTGGAGCAGCAAACAGAGTTTCAAGTGTGCGAAAAAGTTCACCTATTAGGTCTTTAGACCCCAAGAAAGTAGTATCATCAGCTAAAGGTGCTTCCCATGTCAAGAATTATGAAAGTACAGTTAAGGGTATGGAGCGTTTGCAGTTAGAAGATGATGAGAGGGCCCCTTAA 1419 0.4341 MEPRVANKFRLGRKIGAGSFGEIYLGTNVQTNEEVAIKLENVNTRHPQLLYESKLYRILQGGTGIPNIKWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDLKPDNFLMGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLRAGTKKQKYEKISEKKVTTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARASAPNAGTSSGMPPPMTSAADRQTGGEEGRPPGLVSVDSRRIISGPILNSVTSLKQKNAVIPDSAVSKDAMLSSTNILGQSSGSRRVAAGSRETFAGVELDPRTRMAEASPGAANRVSSVRKSSPIRSLDPKKVVSSAKGASHVKNYESTVKGMERLQLEDDERAP* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2275 472 PANTHER CASEIN KINASE-RELATED 1 454 - -
Ahy13g2275 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Ahy13g2275 472 MobiDBLite consensus disorder prediction 304 323 - -
Ahy13g2275 472 MobiDBLite consensus disorder prediction 412 472 - -
Ahy13g2275 472 Gene3D Transferase(Phosphotransferase) domain 1 1 318 - -
Ahy13g2275 472 PANTHER CASEIN KINASE I-LIKE 1 454 - -
Ahy13g2275 472 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Ahy13g2275 472 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2275 472 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ahy13g2275 472 MobiDBLite consensus disorder prediction 304 342 - -
Ahy13g2275 472 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2275 472 CDD STKc_CK1_delta_epsilon 8 282 - -
Ahy13g2275 472 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2275 Ahy-Chr13 46732129 46738993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2275 1 227 CBL-interacting serine-threonine protein kinases AT4G24400 27.092 4.03e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ahy13g2275 Pkinase 5.50E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2275 K02218 - gmx:100811567 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2275 13 46732129 46738993 Ahy13g2275 13 46732129 46738993 ECH