Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2213 ATGGCATCCATGCTGGATTCCGGAAACTTTGTAATCTATGATGATTCACATGTTGTTGTGTGGCAAAGCTTTGATCATCCAACCGATACCATTTTAGGAGGTCAGAACTTAACTGCAGCAAACAGATTGGTGTCTAGTTTGTCCAAAACAGATCATTCCACTGGACTTTTCTATCTTATCATGCAAGAATCGGATAGCAACCTTGTTGCTTATCCCCTCAAAACCTTACCATACGCTGAGTATCACTACTGGGCTGAGTTTGACAATGCTACTACCGGTTCGGTGCAGCTGAGTCTTAACACGGAAGGATTTCTTTGCCTAAGAGAGCTTCAATGTTTTGCCAACAACACAAACTTGTTGAGAAATAATAAGTCAAAGAAACAGAACACAACTTCAATATACCGGGCAACGTTTGATTTTGATGGGGTTTTCAGATTGTACGAGCATCAATTTGATGCTGAGGCAAATAGAAGGAAATTAAGTGTTCAAATTAGGTGGGAAGCCTTGCATGATAAATGCCAAATCAATGGTTTTTGTGGCTTCAACAGTTACTGTTCCAACACCAATATGTGTCACTGTTATCCTGGTTTCGTCCCCATCAGCAACAATGGCATGTTTCTGGAATGCAAACTGAACTACAGCAAAGATGAATGTCAATCTAATCCTGACCCATCTTCGCTGTACGATGTTACTCTTTTGGAGCACATGTCATGGAGTGATTTCCCATATTTGGTTACAAAAGAAACAACAATGGAAGCATGTGAGGAGTCTTGCAAGGAAGATTGTGATTGTGGGGGAGCATTGTATGCAAATAATGGTGGTATCTGTAGCATATACAGGCTTCCACTCAGATATGGAAGAAAGGTTCCAAATGCATCAGACACAGCCACAGCCATTTTCAAAGTGCCTTATCATTCAGGATTTCTAATTAACCAAACACATCTAGACTCGGATTCCCATGTTGTTGTTGATAACAAGAGAAGCCTAATACTGATTCTATCCTCTTCTTTGGGATCTGTTACATTGCTCTGTGTGATCATTGCTGTCTCGGTTTTCTTCAATTATAGGCATCATGTTTATAGTTATGCAAAGTTGTCTGCAAGCTCAAACCTGGGATTCACCAAGGAATGTTCATTGCGCTCGTTTTCCTTTGACGAACTTGTGGAAGCAACTAGTGGCTTCACGGAAGAGATAGGAAGAGGGTCTTATGGAGCAGTTTATAAAGGAACAGTAACAGGTGATGGTAGTAACAAAAGCGTTGCTGTGAAGAGACTAGAGAGGATTGCTGATGATGAAGGAGAGAGGGAATTTCGAGCTGAAGTTACTGCCATTGCTCGAACTCACCATAGGAATCTGGTTAAGCTTGTTGGGTATTGTATTGAAGGGTCAAGGGAGCTTCTTGTTTATGAATATGTTAGCAATGGCTGCCTCGCGAATCTTCTGTTTAAGGGTAAGAATCATCATCATCATCATAATGATCAGGCACTTCCATGGAAAGAGAGGATTAAAATTGCATTGGATGTAGCCAGAGGAGTGCAGTATCTGCATGAAGAGTGCGGAGTTCGAATCGTCCATTGCAATCTTAAGCCACAAAATATACTGATTGATGAAGCATGGACAGCAAAGATATCTGATTTTGGATTAGCACGGCTTTTGAAGCACCCTCAACAACCAGAGTTGCTTACTGATGATGAGGTAAGAAGCAGTTACTTGGCACCTGAATGGAAGAATGAGGCATCACCATCTTTATCTTCATGTTCATCTCCATTGGTGTCTGTGAAAGTTGATATTTACAGCTATGGGGTTGTGGTGTTGGAGATAGTGTGCCGCAGAAGAAGTATAGATGTAAATGTGAAGTGTCCAGAGGAGGTTCTTCTTTCAAGTTGGGTGTATCAGTGTTATGCAGAAGGAGAGTTGAGGAAGCTTGTTGTTAATGAATCAGAAGAAGAGGATACAGATTGGAAGACATTAGAGAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAGGATGATCCATCACTGCGTCCTTCAATGAAGAATGTTATCTTGATGTTGGAAGGTTGGAAACCTATTCCAACTCCTCCATCTCCTCTTGCTTCAACTTAA 2106 0.4141 MASMLDSGNFVIYDDSHVVVWQSFDHPTDTILGGQNLTAANRLVSSLSKTDHSTGLFYLIMQESDSNLVAYPLKTLPYAEYHYWAEFDNATTGSVQLSLNTEGFLCLRELQCFANNTNLLRNNKSKKQNTTSIYRATFDFDGVFRLYEHQFDAEANRRKLSVQIRWEALHDKCQINGFCGFNSYCSNTNMCHCYPGFVPISNNGMFLECKLNYSKDECQSNPDPSSLYDVTLLEHMSWSDFPYLVTKETTMEACEESCKEDCDCGGALYANNGGICSIYRLPLRYGRKVPNASDTATAIFKVPYHSGFLINQTHLDSDSHVVVDNKRSLILILSSSLGSVTLLCVIIAVSVFFNYRHHVYSYAKLSASSNLGFTKECSLRSFSFDELVEATSGFTEEIGRGSYGAVYKGTVTGDGSNKSVAVKRLERIADDEGEREFRAEVTAIARTHHRNLVKLVGYCIEGSRELLVYEYVSNGCLANLLFKGKNHHHHHNDQALPWKERIKIALDVARGVQYLHEECGVRIVHCNLKPQNILIDEAWTAKISDFGLARLLKHPQQPELLTDDEVRSSYLAPEWKNEASPSLSSCSSPLVSVKVDIYSYGVVVLEIVCRRRSIDVNVKCPEEVLLSSWVYQCYAEGELRKLVVNESEEEDTDWKTLERMVKVGLWCVQDDPSLRPSMKNVILMLEGWKPIPTPPSPLAST* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2213 701 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 698 - -
Ahy13g2213 701 Pfam D-mannose binding lectin 2 40 IPR001480 -
Ahy13g2213 701 Gene3D - 28 168 IPR036426 -
Ahy13g2213 701 Gene3D Phosphorylase Kinase; domain 1 367 471 - -
Ahy13g2213 701 Gene3D Transferase(Phosphotransferase) domain 1 472 691 - -
Ahy13g2213 701 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 2 698 - -
Ahy13g2213 701 Pfam Protein tyrosine and serine/threonine kinase 394 683 IPR001245 GO:0004672|GO:0006468
Ahy13g2213 701 PIRSF SRK 1 701 IPR024171 GO:0004674
Ahy13g2213 701 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 48 IPR036426 -
Ahy13g2213 701 ProSitePatterns Protein kinases ATP-binding region signature. 398 423 IPR017441 GO:0005524
Ahy13g2213 701 ProSiteProfiles Protein kinase domain profile. 392 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2213 701 SUPERFAMILY Protein kinase-like (PK-like) 374 688 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2213 Ahy-Chr13 44023909 44028411 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2213 289 698 Receptor kinase-like Gene Family AT4G18250 32.692 1.55e-59 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy13g2213 PK_Tyr_Ser-Thr 4.30E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2213 - - ahf:112707637 1381.7