Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2211 ATGTCGAAGATTCGAGTTCTCAAGTACAAAAGGCTCTTGGAGATTGGGGACTTGGGGCTGAATGAGGAAGTGGCTTTGAGGAGATTTTCATACACTGAGCTCAAGAGAGCAACCAACGGTTTCAAACAAGAGTTGGGAAAGGGCTCTTTTGGAGCAGTTTACAAAGGGGTTTTATACAAGGCGGGAAGATGTAGGAGATTCATTGCGGTGAAGAGACTTGAGAAGTTGGTTGAAGATGGAGAAAGAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTCTGTGCCGAGGGTCCCAAAAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCAGATTGGGATGAAAGAGTCAGAATAGCTCTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGTGAGGCACCCATCATTCACTGCGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCCGATTTCGGGCTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACTTTCACAGGGGTTAGAGGGACAAGAGGATACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAGACAGTGTGTTGCAGGAGAAACCTTGATGTTAATGTGTCAGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCCTATAAGTGCTTTGTTGCTGGAGAGGTGCACAAGCTAGTTCATTGGGAAGAAGTGGATAAGAATGTTGTGGAAAATATGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTGTTCTCCGGCCTTCAATGAAGAGTGTGGTGCTCATGCTTGAAGGGGTTACTGATGTGCCAGTTCCTCCTTGCCCAACTTCTAATTCCATGTGA 981 0.4587 MSKIRVLKYKRLLEIGDLGLNEEVALRRFSYTELKRATNGFKQELGKGSFGAVYKGVLYKAGRCRRFIAVKRLEKLVEDGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGDERLPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRNLDVNVSEPNEILLSGWAYKCFVAGEVHKLVHWEEVDKNVVENMVKVALWCIQDEPVLRPSMKSVVLMLEGVTDVPVPPCPTSNSM* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2211 326 Gene3D Phosphorylase Kinase; domain 1 13 118 - -
Ahy13g2211 326 SUPERFAMILY Protein kinase-like (PK-like) 24 310 IPR011009 -
Ahy13g2211 326 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Ahy13g2211 326 Gene3D Transferase(Phosphotransferase) domain 1 119 318 - -
Ahy13g2211 326 ProSiteProfiles Protein kinase domain profile. 39 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2211 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Ahy13g2211 326 SMART serkin_6 39 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2211 326 Pfam Protein kinase domain 42 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2211 326 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 324 IPR045874 GO:0004672
Ahy13g2211 326 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 2 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2211 Ahy-Chr13 44002084 44003268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2211 20 315 Receptor kinase-like Gene Family AT1G56120 45.515 1.76e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy13g2211 Pkinase 2.40E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2211 - - ahf:114924106 659.448