Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2209 ATGTCCACATACGAGCATGATGTTAAGACTGATTCTGATAATGATTTGGGTGATTTTGATTATGAATCGAATGCACACGATGATGTTGAAGATGATGATGTTGATTCGTTGGATTCTACTAGCAAGAGTGAACAAGATTGTAGTGTAAAAAGAATAGCAATTTTAATGGTTGAGAATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAATGCTTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATGACGTCGTGAAGGATAAGGAAGGTAAAATTATTTGCAGGCAACTTGTTTGCAATAAAGAGGGCTGGAGGAATATGATGTATCTTGATCTGGATAATAGATCAAGGGAGGCAAGGTCACTCATGGAAACCAAGTGTCCAGCTCGTCTTAAGATCAAGGTTGACTACGGCTGTGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCATGATTTGACCCCCCCCCCCAATTTACGCATCTTGTTCCAGCCAATCGTCGTCTCACTGTTACTGATAAAGTCCAAGTGA 558 0.405 MSTYEHDVKTDSDNDLGDFDYESNAHDDVEDDDVDSLDSTSKSEQDCSVKRIAILMVENIWNLEFRTEDEACQFYNAYACWHGFVMRKDDVVKDKEGKIICRQLVCNKEGWRNMMYLDLDNRSREARSLMETKCPARLKIKVDYGCGRWKVSCFVESHNHDLTPPPNLRILFQPIVVSLLLIKSK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2209 185 MobiDBLite consensus disorder prediction 1 41 - -
Ahy13g2209 185 MobiDBLite consensus disorder prediction 1 23 - -
Ahy13g2209 185 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Ahy13g2209 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2209 Ahy-Chr13 43883698 43884255 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2209 FAR1 1.30E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2209 - - adu:107460934 285.034