Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2173 ATGCCCCGTGGAGTACTAGAAGTGGATCCACCACCTCCAGCATCTAATGAAGAGCCATCCCCTAAGAAAACTGATACAACTTTGTTCTTCCTTGGAGGGATAGTGATGTTCATCGTATTGTTGATAATTTTGGTTGTATTTTGGAAGCGTATCAAAGGGAGCAAAAATACAACACCTCCTAAAACTACTAAAGGCAAACAAGGGAAACTTACTGAAACAGCAGAAGTTATGGATATGATGTTTTCATCTAAACAACAGCAAGGATCCATGGAGTTGTTGAGTGGGAACCTTAGGACAATTAGTTACTTTGACTACCAGATATTAAGAAGAGCAACCAAGAATTTTTCTCCTACTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAGAAAGAGAGTTTCTGGCAGAGGTGAGGTTGATCACAAGTATCCAACACAAAAATCTCGTTCGCCTTCTTGGATGTTGCATAGATGGACCACAAAGGATACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACTTCTTCATATATGGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGATTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGGGTTATACAGCACCTGAATACGCTTTAAGAGGAGAATTATCAGAAAAGGCGGATATCTATAGTTTTGGAGTTCTGTTGCTCGAAATTATTTGTTGTAGAAAAAACACAGATCTCACTTTGTCATTGGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAACTCAAAGATTATGGAGCTTGTAGATCCAAAGCTGAAAGAAGAGGGGTTCGTGGAGAAAGATGTTATGCAAGCATTCCACGTGGCATTCCTCTGCCTCCAGCCACTTGCAAATCTAAGACCTCCGATGTCAGAGATCGTGGCACTCTTGACATTCAAAATTGACATGGTCACAACACCAATGAGGCCTGCGTTTCTTGATCGAAGGCGCAAAACTGATTTTCAAACCCCTTCCCCAGAAGTAATATCCATGCTTTCACATCTCCCATGA 1218 0.4163 MPRGVLEVDPPPPASNEEPSPKKTDTTLFFLGGIVMFIVLLIILVVFWKRIKGSKNTTPPKTTKGKQGKLTETAEVMDMMFSSKQQQGSMELLSGNLRTISYFDYQILRRATKNFSPTNLLGSGGFGPVYRGEREFLAEVRLITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDFFIYGNNADRFLNWSTRFQIVLGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLLLEIICCRKNTDLTLSLEMQYLPEYAWKLYENSKIMELVDPKLKEEGFVEKDVMQAFHVAFLCLQPLANLRPPMSEIVALLTFKIDMVTTPMRPAFLDRRRKTDFQTPSPEVISMLSHLP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2173 405 PANTHER RECEPTOR-LIKE KINASE 94 384 - -
Ahy13g2173 405 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g2173 405 SUPERFAMILY Protein kinase-like (PK-like) 94 369 IPR011009 -
Ahy13g2173 405 Gene3D Phosphorylase Kinase; domain 1 83 132 - -
Ahy13g2173 405 SMART serkin_6 115 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2173 405 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 384 - -
Ahy13g2173 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Ahy13g2173 405 MobiDBLite consensus disorder prediction 1 18 - -
Ahy13g2173 405 ProSiteProfiles Protein kinase domain profile. 115 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2173 405 Gene3D Phosphorylase Kinase; domain 1 133 171 - -
Ahy13g2173 405 Pfam Protein tyrosine and serine/threonine kinase 133 365 IPR001245 GO:0004672|GO:0006468
Ahy13g2173 405 Gene3D Transferase(Phosphotransferase) domain 1 172 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2173 Ahy-Chr13 41681752 41685021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2173 91 397 Receptor kinase-like Gene Family AT1G56120 41.618 1.09e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy13g2173 PK_Tyr_Ser-Thr 3.70E-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2173 - - adu:107478947 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2173 13 41681752 41685021 Ahy13g2173 13 41681752 41685021 ECH
Ahy13g2173 13 41681752 41685021 Ahy3g1865 3 39705979 39709570 hybridization
Ahy11g3100 11 148636447 148639346 Ahy13g2173 13 41681752 41685021 PCT
Ahy1g1871 1 95269589 95272422 Ahy13g2173 13 41681752 41685021 PCT
Ahy13g2173 13 41681752 41685021 Ahy11g3100 11 148636447 148639346 PCT
Ahy13g2173 13 41681752 41685021 Ahy1g1871 1 95269589 95272422 PCT