Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2172 ATGAGGCGGGAAACGACATTGGCGGAGGAGGAGGTGGTTGGAGGGGTGGGAAGGAAATGGAGTAGTAGTGGTGTTGGAGTTGGTGATGGTCGAAGGAAAGAGAGGGTAAGGATGGTGGAGGGGATGGCGATGGTGAAAGGGGTTGTGGAGGCAGAGAATGGTGGATGCTATGCGCCCCTGCCTCTTCCCTCCACCCACTTCCTCTGTCTTCTTCGTCAAACGATGAACCCCGTTTCTTCTTCTAGCCCCTCTTTCCTCCGCTTCTTCCTTTACTCACTGTCCACTGAAGAATTGTCTATCCTTTCTAAGCCTTCTGGCGATGCGAATTCAGAGATTGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGGCCTCCCGAAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCCAAATGGCGTGGTGAGAGTGAACGCATGGTGCGGTATTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCGCTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCTGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGTGGCCCCTGATGTCAATATAGATGACGTGGCTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTTGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGTGGGAAAAAAATTTACTTTTTTTTAA 969 0.4654 MRRETTLAEEEVVGGVGRKWSSSGVGVGDGRRKERVRMVEGMAMVKGVVEAENGGCYAPLPLPSTHFLCLLRQTMNPVSSSSPSFLRFFLYSLSTEELSILSKPSGDANSEIGIRRPWKGVLMFGPPETGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRYLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLLNFESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCCDASLNGMRRKIVGKKFTFF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2172 322 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 113 317 - -
Ahy13g2172 322 CDD AAA 115 258 - -
Ahy13g2172 322 Gene3D - 113 258 IPR027417 -
Ahy13g2172 322 SMART AAA_5 117 260 IPR003593 -
Ahy13g2172 322 PANTHER AAA DOMAIN-CONTAINING 113 317 - -
Ahy13g2172 322 Pfam AAA+ lid domain 280 314 IPR041569 -
Ahy13g2172 322 ProSitePatterns AAA-protein family signature. 230 249 IPR003960 GO:0005524|GO:0016887
Ahy13g2172 322 Pfam ATPase family associated with various cellular activities (AAA) 121 258 IPR003959 GO:0005524|GO:0016887
Ahy13g2172 322 Gene3D - 259 315 - -
Ahy13g2172 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2172 Ahy-Chr13 41650326 41653833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2172 107 314 Calmodulin-binding Proteins AT3G56690 42.180 3.09e-41 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2172 K07767 - aip:107633021 395.586