Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2171 ATGGAGCCTCAGACTCAGGAAGTATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCCTAATGTTAGTGATCAAGTGGATGAAGACGTAACTTCTGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTAATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGCATATGTTTGTTCCTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAATCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAACCATGATCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTGGCTAGCCAGTGTGGTGGGTACGAAAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACATCTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTATTGAAAAGGGCAGAGAAGGAGTGTTTCGACAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACATATAAGAAGAATAGATACAGATTGCCGGTGGTAATATTCTCGGGAATTAACCACCATAATCAAACCGTTGTATTTGGTGCTGCGATAGTTTCGAATGAGAGGAAAAAGCACTTATGTGTGGTTACTAAAACAGCTTCTCATAGCAATGAAGGGAAAGATACCGACTTCAGTAATTACGGATGGTCATCAATCGATGGCTATCGCTATTCAGGAGGTGTTTCCGAATGCACATCATAG 1107 0.393 MEPQTQEVSNSQRHTSDQNVPNVSDQVDEDVTSDAVDMDQYRINSWEDIGKINFSSLSMKNICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKAYVCSCEGYRLEKWNHMKNRVREPKSETRCGCMSKLHVFFDAVTESWVVRDFCDEHNHDLVVPKLARMLRSHKKMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTSAMAYLETLAARDRNLFYSIEKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATYKKNRYRLPVVIFSGINHHNQTVVFGAAIVSNERKKHLCVVTKTASHSNEGKDTDFSNYGWSSIDGYRYSGGVSECTS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2171 368 Pfam MULE transposase domain 284 333 IPR018289 -
Ahy13g2171 368 Pfam FAR1 DNA-binding domain 75 164 IPR004330 -
Ahy13g2171 368 PANTHER OS02G0262500 PROTEIN 67 327 - -
Ahy13g2171 368 MobiDBLite consensus disorder prediction 1 29 - -
Ahy13g2171 368 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 327 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2171 Ahy-Chr13 41639671 41643244 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2171 FAR1 2.40E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2171 - - ahf:112719698 654.825