Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2134 ATGGAGAAGCTCTTTTCATTGAACTGTTGCATTGGTTACATTCTTATTGTTTACTCTCTCTTTGCATGTGTGCATGGCAAAGAACAATTGTCATGCAATCAAACACCATACCCAAATGTTTGCAAGCATTACGTTGAGACAGCTACAAATACATTATTCTCAGAAACATCATCGACCCAAGATGAACATGTTTCTTCACCTTCTTATTCGTTCCACGGCATGGCCCTTAAGGTCACCATGGACCAAGCCATTAGAGCCCATGAACTAGTCTCAACCATGGACCCTAAAAACTTCAAAGAAAACAAAAAAGCCAAGATGGCTTGGGAAGATTGTTTGGAGCTCTATGAGGACACCATTTATCAGCTGAACCGTTCAATGAAATCGAAAAACCTAAACGACAAGTTAACATGGCAAAGTGCTTCCATTGCAAACCACCAAACATGCCAAAACGGTTTCATTGAATTCAACTTGAATTCTCACCTAAACTTGTTCCCAACCATGCTGTCCAACTTCTCCAAATTGCTCAGCAACTCCTTGTCCATGTTAGGATTTGGTTGA 558 0.405 MEKLFSLNCCIGYILIVYSLFACVHGKEQLSCNQTPYPNVCKHYVETATNTLFSETSSTQDEHVSSPSYSFHGMALKVTMDQAIRAHELVSTMDPKNFKENKKAKMAWEDCLELYEDTIYQLNRSMKSKNLNDKLTWQSASIANHQTCQNGFIEFNLNSHLNLFPTMLSNFSKLLSNSLSMLGFG* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2134 185 SMART PMEI_2 25 181 IPR006501 GO:0004857
Ahy13g2134 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 182 IPR035513 -
Ahy13g2134 185 PANTHER PECTINESTERASE 23 181 - -
Ahy13g2134 185 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Ahy13g2134 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 183 IPR035513 -
Ahy13g2134 185 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Ahy13g2134 185 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 23 181 - -
Ahy13g2134 185 CDD PMEI-like_3 30 181 - -
Ahy13g2134 185 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2134 Ahy-Chr13 39943683 39944541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2134 10 179 Carbohydrate Esterase AT1G23200 39.548 2.24e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2134 - - ahf:114924976 374.785