Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2133 ATGTTAGAAGCGGAGCAAGAAGTCAGAGGAAGGAGGAGGTTATTGCTTTCATCATCATCAAATCATAACAAACACGGACATGGCTTCCCTGAATGGCTATCGGTTTCCGATAGGAGGCTTCTTCAGGCGGCGACACCACCAAAGGGTGACGTGGTGGTGGCGCAAGACGGGAGTGGGAACTACAAGACGATAACGGAGGGAGTGGCGGCCGCCGCTAGGATTGGGGGAGGAAGGAGGGTTGTGGTGCACGTGAAAGCAGGAGTTTACAAAGAGAATGTTGATATCAAGAAGACAGTGAAGAACATAATGATAGTTGGAGATGGAATTGACGCTACCGTTGTCACTGCTGACGGTAACGCACAAGATGGATCCACCACTTTCCGTTCAGCTACATTTGGGGTTTCCGGTGACGGGTTCATAGCGCGGGACATAACCTTTGAGAACACGGCGGGTCCACAGAAGCACCAGGCCGTAGCTCTCCGGTCTGGCTCCGACCACTCCGTCTTCTACCGCTGCAGCTTCAAGGGCTACCAAGACACCTTATACGCCTACGCCCAGCGCCAATTCTACCGCGACTGCGACGTGTACGGCACCGTGGACTTCATCTTCGGCGACGCCGCCTGCGTCCTCCAAAACTGCAACATCTACGTCCGAAGACCCATGGGCAACCAGGACATCACCGTCACCGCCCAAGGTAGAACCGATCCCAACGAGAACACCGGCATCGTGATCCACAACAGCCGCATAACTGCTGCCGGCGACATGAGATCCGTTCAGGGCTCCTTCAAGACCTTCCTCGGGCGTCCATGGCAGAAGTACTCAAGAACCGTGATCATGAAGAGCGGCCTAGACGGCTTGATTAACTCGGCCGGTTGGAAACCATGGAGTGGAAGCTTTGCTCTCAGCACACTCTATTATGGTGAGTACATGAACACTGGTCCTGGTGCTAACACTGCTGGTAGGGTTCACTGGCCTGGCTTTCATGTTATTAGTAGTCCCTCTGAGGCTGTCAAGTTTTCTGTTGGTGATTTCTTGGCTGGTGGTTCATGGATTCCCGGCACTGGTGTCCCCTTTGATGCAGGTTTGTAA 1089 0.5372 MLEAEQEVRGRRRLLLSSSSNHNKHGHGFPEWLSVSDRRLLQAATPPKGDVVVAQDGSGNYKTITEGVAAAARIGGGRRVVVHVKAGVYKENVDIKKTVKNIMIVGDGIDATVVTADGNAQDGSTTFRSATFGVSGDGFIARDITFENTAGPQKHQAVALRSGSDHSVFYRCSFKGYQDTLYAYAQRQFYRDCDVYGTVDFIFGDAACVLQNCNIYVRRPMGNQDITVTAQGRTDPNENTGIVIHNSRITAAGDMRSVQGSFKTFLGRPWQKYSRTVIMKSGLDGLINSAGWKPWSGSFALSTLYYGEYMNTGPGANTAGRVHWPGFHVISSPSEAVKFSVGDFLAGGSWIPGTGVPFDAGL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2133 362 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 24 361 - -
Ahy13g2133 362 Gene3D - 46 362 IPR012334 -
Ahy13g2133 362 Pfam Pectinesterase 50 347 IPR000070 GO:0030599|GO:0042545
Ahy13g2133 362 ProSitePatterns Pectinesterase signature 2. 195 204 IPR033131 -
Ahy13g2133 362 SUPERFAMILY Pectin lyase-like 44 361 IPR011050 -
Ahy13g2133 362 ProSitePatterns Pectinesterase signature 1. 76 95 IPR018040 -
Ahy13g2133 362 PANTHER PECTINESTERASE 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2133 Ahy-Chr13 39939485 39942015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2133 10 362 Carbohydrate Esterase AT1G23200 59.718 1.50e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2133 - - gmx:100816802 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2133 13 39939485 39942015 Ahy3g1836 3 37986409 37989820 hybridization