Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2130 ATGGCGTCTAAACGGTTGTTTGACGATTCTGATAGAGATGCAGAAGAGGCAAGCGACAAACGCATGAGACCGAATAGGCCTTCTCTTGCTTCGATAATAGGGGAAGCAGTAAGGGTGAAAAACATGCAGAGCCTGTTGTCAGGGTTGGAACCTTTGCTAAGAAAAGTGGTAAATGAAGAGGTGGAAAGAGTCATAATAAGACACCGTCATGGAAGTAACTACACGCGCTCCCCTTCACTGAGAATTGAAGCGGCATCATCGTCATCATCGGAGCAACCACCGAAGTTGCAACTCATGTTCACAAACGAACTTTCCCTGCCCATATTCACCTCAAGCAGAATACTCGACGCACAAGGGAACCCCATGCAAGTGATTCTTGTTGACAAAACCAACAATGATCAAATGGTTCGAACAAGCCTTCCCTATCCCGTAAAGCTAGAGCTGGTGGTTCTTGATGGTGATTTTCCCGGCGAAGAATCGTGGTGGAGCAGCGAGCAGTTTAACAGGCATATAGTGAAGGAGAGAACAGGGAAGAGGCCCTTGCTCAGCGGAGAATTGAATCTCACCATGAGGGATGACATTGCACCCATGAATGGGGACATTGAGTTTACCGATAACTCTAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTCAGGGTTTCTCCCAACCAACAAGGTGCTATCAGAATTCGTGAAGGCATCACTCAAGCCTTCGTAGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGTTGGACGACCAAGTGTGGCGCCTAGAAAAGATCGGGAAAGACGGAGCTTTCCACAAAAAACTCTCGGCGGAGGGGATTAATACAGTCCAAGAATTCCTCAAGTTATCGGTTGTTGATCCTCAAATGCTTAGAAAGATATTAGGGATTGGGATGTCGGAGAAAATGTGGGAAGCGACAATAAAGCATGCAAAGACATGTAACATGGGCAACAAAGTGTATATGTACAGTCATGCTAATTATACCATCTATCTGAGTCCTATATGCCAGTTGATTAGAGCTGATATCAATGGCCAAATCCTGCAAGGCCGAGACCTAAACAGCTACAATAGGGTGTATTTAGAGAAAATGGTGAGCGAAGCATATAGCAGATGGAATGAGTTGGAGGAAATTGATCAAGCCGTTTTGAATGATAACGTTGCTTTGTTAACACAAGGGGAGGAGCAATTTGCAAACAACCATGAAGCGGCAGCAGCTACACTTGAATATGATGAAAGCAAGTATTTTGGCTATGTGCCAAGCAGTAGCCATAGCCATAATAATGAGTTGCCAGACTGGGAACTGAATGCCATGGCTTACGGCTTCTCAAAGACTGGAGCTTCAACTTCTGATTCTGAGTGGCCCAATTGA 1395 0.453 MASKRLFDDSDRDAEEASDKRMRPNRPSLASIIGEAVRVKNMQSLLSGLEPLLRKVVNEEVERVIIRHRHGSNYTRSPSLRIEAASSSSSEQPPKLQLMFTNELSLPIFTSSRILDAQGNPMQVILVDKTNNDQMVRTSLPYPVKLELVVLDGDFPGEESWWSSEQFNRHIVKERTGKRPLLSGELNLTMRDDIAPMNGDIEFTDNSSWIRSRKFRVAVRVSPNQQGAIRIREGITQAFVVKDHRGELYKKHHPPMLDDQVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVVDPQMLRKILGIGMSEKMWEATIKHAKTCNMGNKVYMYSHANYTIYLSPICQLIRADINGQILQGRDLNSYNRVYLEKMVSEAYSRWNELEEIDQAVLNDNVALLTQGEEQFANNHEAAAATLEYDESKYFGYVPSSSHSHNNELPDWELNAMAYGFSKTGASTSDSEWPN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2130 464 Pfam Calmodulin binding protein-like N-terminal domain 96 244 IPR046831 -
Ahy13g2130 464 PANTHER OS02G0177800 PROTEIN 1 436 IPR012416 GO:0005516
Ahy13g2130 464 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Ahy13g2130 464 Pfam Calmodulin binding protein C-terminal domain 327 386 IPR046829 -
Ahy13g2130 464 MobiDBLite consensus disorder prediction 1 27 - -
Ahy13g2130 464 MobiDBLite consensus disorder prediction 1 23 - -
Ahy13g2130 464 PANTHER PROTEIN, PUTATIVE-RELATED 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2130 Ahy-Chr13 39807442 39809789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2130 3 393 Calmodulin-binding Proteins AT5G57580 46.000 8.25e-108 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2130 - - aip:107644281 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2130 13 39807442 39809789 Ahy3g1834 3 37863757 37866087 hybridization
Ahy13g2130 13 39807442 39809789 Ahy15g2761 15 144955988 144961045 PCT
Ahy13g2130 13 39807442 39809789 Ahy5g2499 5 99999036 100003791 PCT
Ahy15g2761 15 144955988 144961045 Ahy13g2130 13 39807442 39809789 PCT
Ahy5g2499 5 99999036 100003791 Ahy13g2130 13 39807442 39809789 PCT