Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2126 ATGACGACGCCGTTTTCGGCGGGGCTGAAGCACTTGGATGGAGGCGGAGGACTGGCGGTGCTCTCCAATTCCATCGACAAGGTTGATTCGTCCTCCACTTCCTCCTCGACGGCGCTCAGTGGCAGCGTCAAGTGCTCTAAGCTGGTAGACTCGCCCATTTTGATTTTCTTGTTCTTCCACAAGGCGATTCGGAACGAGCTAGACGCGCTGCACCGTCTCGCCATGGCATTCGCCACCGGCAACTCCTCCGATATCCAGCCTCTCTCCCAGCGCTACCATTTCCTCAGCTCCATGTACAGGCACCACTCCAATGCCGAAGACGAGGTGATTTTTCCAGCCCTTGATATACGTGTGAAGAATGTTGCAAAGACATATTCTCTTGAACACAAAGGTGAAAACAATCTTTTTGATCATCTATTTGAGCTGCTAAATTCTTCCACCCACAACGATGAAAGTTTTGCTAGAGAGTTAGCATCCTGCACAGGAGCTTTGCAGACGTCAGTTAGTCAACACATGGCAAAGGAAGAGGAGCAGGTATTTCCTTTGCTTATTGAGAAGTTCTCTCTCGAGGAGCAGGCATCTTTAGTTTGGCAGTTTCTTTGCAGTATTCCCGTGAACATGATGACAGAATTTCTTCCATGGCTTTCAAGATCCATATCACCTGATGAACGACTGGATTTGCAGAATTGCTTAATCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCAAGTGGATGGAAGGGAGAAGCAGTGTTAACACAGTTGACAGTTGTGTAAAACATTCTCAAGTTCAATCTAGTAGTAGCCCATCAACTGGAAAACGGAAATATTCTGGATCTACCCTGGATGACTCTGATGCCATTGGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATTAGAAAAGAGCTAAGTGAGATAGCAGTGGAGACCAGAAAGATACAATGTTCAGGGGATTTTACAAATCTATCCTCTTTTAATCAAAGATTGCAGTTCATTGCCGAAGTTTGTATATTTCATAGTATTGCTGAGGACAAAGTTATTTTTCCAGCAGTAGATGGAGAATTGTCATTTTTTCAGGAGCATGCTGAAGAAGAAAGCCAGTTTAATGACTTCCGGTGTTTGATTGAAGGTATTCAAAGTGAAGGAGCAACATCTAATTCAGAAGTTGAATTCTTTTCAAAGTTATGCTCACATGCTGATCATATAATGGAAACCATAGAGAGACATTTCCATAATGAAGAAGTTCAGGTCCTTCCACTTGCAAGAAAGCACTTTAGCTTTAAAAGGCAATGCGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTGAAATTGATTGAGCGCGTCCTTCCATGGTTGGTAGGATCATTAACTGCAGAAGAAACAAAGATGTTTCTGAGAAACATGCAGTTGGCAGCTCCAGAAATGGATTCTGCTATAGTTACACTCTTCTCTGGGTGGGCTTGCAAGGCTCGTATTGAAGGTCTATGTTTGTCTTCTGGTGCGTCAGGTTGCTGTCCTGTTCAAAGACTTTCTGATATTGAAGAAAACATTGCTTGGCCATCCTGCGCTTGTGCTTCCGCATCATCTGTAAGAGATTGTTTAGTATTAGACAAATCAGATGGGAACAGAAAGTCATTCAAGCGAAACTTATTAGAAACCCACAACAATGGAGATATCACTGAAAATCCAGAGACTGAAAATGTCCAAAAACAATGTTTTGCTACTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAACAGTAACAATTTGGGGCTGAGTTCTATTTCTACAGCCAAGTCCTTGCGGTCCTTGTCTTTCAACTCTTCTGCCCCATCTCTTAATTCCAGTCTTTTTGTATGGGAAACAGAAAGCAGCTCATCTGATGTTGGATCTGCACAAAGACCAATTGATACCATATTTAGTTTCCACAAAGCTATACGAAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTAATGGTGATGAGATAGTTCTTCGGCAATTTAGTGGAAGATTTCGTCTTTTATGGGGCTTATATAGAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCAGCATTGGAGTCAAAAGAGGCACTTCATAATGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAACAATTATTTGAGGATATTTCCTGCGTTCTTTCTGAGCTTTCTATGCTTCACGAAGCCTTGCAGATGAACCATATGCCAGAGAACTTAAGTGAAAGTAATTTTAGAACATCTGATTCCAAGGGTAGTGAGAATATTAAAAAGTATAATGAACTCGCGACTAAGCTTCAAGGAATGTGCAAATCCATAAGGGTTACTCTGGATCATCATCTTTTCAGGGAGGAGTGTGAACTGTGGCCATTATTTGGGAAACATTTCACTGTAGAAGAACAGGACAAGATAGTGGGACGGATAATTGGAACAACTGGAGCTGAAGTTCTCCAATCAATGTTGCCATGGGTAACTTCCGCGCTTACTCATGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCAACTAAAAACACTATGTTCAATGAATGGCTCACTGAATGCTGGAAAGATAGTCCAGCACCTATAACACAGATAGAATCATCAGATCATAACACTTCTCGAAGAGGTGCTGAATATCAAGAAAGCTTGGACCATAATGATCAAATGTTCAAGCCTGGTTGGAAAGACATATTCCGGATGAACCAGAATGAACTTGAGTCAGAGATCCGAAAGGTTTATCGTGATTCAACTCTTGATCCAAGGAGAAAGGCATACCTTGTGCAGAATCTGATGACAAGTCGTTGGATAGCTGCTCAGCAGAAATCACTGAAAGCCATAACTGAAGTAGCATCTAATGGTGAACAAATAGAAGGGCAGTCACCATCATTTCGGAACCCTGATAAACATGTGTATGGGTGTGAGCACTATAAGAGAAATTGTAAGCTACGAGCTGCATGTTGTGGCAAGTTAGTTACTTGCAGATTTTGTCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACATCAGAAATGATGTGTATGCGCTGCCTGAATATACAGCCGATAGGGCCTAAATGCATGACACCTTCATGTAACGAACTTTCAATGGCAAAATACTATTGCAACATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAACATATGCCGTGTCGGACGAGGGCTTGGGATTGATTATTTCCATTGCATGAAATGCAATTGCTGCTTGGGCATAAGATCACAATCACATAAGTGCCTGGAAAAAGGCTTAGAAATGAATTGCCCAATTTGTTGTGATGATTTATTCACGTCAAGTGCTCCAGTTAGAGCTCTGCCTTGTGGCCATTATATGCATTCTGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCTATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTATTTTGGCATGCTTGACGCATTATTGGCTACTGAGGAGCTTCCTGAAGAGTATAAGGACCGGTGTCAGGACATACTCTGCCATGACTGTGACAAAAAGGGCACTTCACGCTTCCATTGGTTATACCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTTATTAAGGGTGAGGAATCAAATTCCAGCTGCTCTTACTCTTAG 3714 0.419 MTTPFSAGLKHLDGGGGLAVLSNSIDKVDSSSTSSSTALSGSVKCSKLVDSPILIFLFFHKAIRNELDALHRLAMAFATGNSSDIQPLSQRYHFLSSMYRHHSNAEDEVIFPALDIRVKNVAKTYSLEHKGENNLFDHLFELLNSSTHNDESFARELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMTEFLPWLSRSISPDERLDLQNCLIKIVPEEKLLQKVIFKWMEGRSSVNTVDSCVKHSQVQSSSSPSTGKRKYSGSTLDDSDAIGTHPIDEILLWHNAIRKELSEIAVETRKIQCSGDFTNLSSFNQRLQFIAEVCIFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEVEFFSKLCSHADHIMETIERHFHNEEVQVLPLARKHFSFKRQCELLYQSLCMMPLKLIERVLPWLVGSLTAEETKMFLRNMQLAAPEMDSAIVTLFSGWACKARIEGLCLSSGASGCCPVQRLSDIEENIAWPSCACASASSVRDCLVLDKSDGNRKSFKRNLLETHNNGDITENPETENVQKQCFATRSCCVPGLGVNSNNLGLSSISTAKSLRSLSFNSSAPSLNSSLFVWETESSSSDVGSAQRPIDTIFSFHKAIRKDLEYLDVESGKLSNGDEIVLRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSELSMLHEALQMNHMPENLSESNFRTSDSKGSENIKKYNELATKLQGMCKSIRVTLDHHLFREECELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTHDEQNKMMDTWKQATKNTMFNEWLTECWKDSPAPITQIESSDHNTSRRGAEYQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKSLKAITEVASNGEQIEGQSPSFRNPDKHVYGCEHYKRNCKLRAACCGKLVTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQPIGPKCMTPSCNELSMAKYYCNICKFFDDERNVYHCPFCNICRVGRGLGIDYFHCMKCNCCLGIRSQSHKCLEKGLEMNCPICCDDLFTSSAPVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLATEELPEEYKDRCQDILCHDCDKKGTSRFHWLYHKCGFCGSYNTRVIKGEESNSSCSYS* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2126 1237 CDD Hr-like 645 805 - -
Ahy13g2126 1237 CDD Hr-like 297 426 - -
Ahy13g2126 1237 ProSiteProfiles Zinc finger CHY-type profile. 983 1052 IPR008913 GO:0008270
Ahy13g2126 1237 Pfam Hemerythrin HHE cation binding domain 294 428 IPR012312 -
Ahy13g2126 1237 Pfam Hemerythrin HHE cation binding domain 57 183 IPR012312 -
Ahy13g2126 1237 Pfam Hemerythrin HHE cation binding domain 643 806 IPR012312 -
Ahy13g2126 1237 PANTHER CHY ZINC FINGER PROTEIN 37 1234 - -
Ahy13g2126 1237 CDD Hr-like 55 181 - -
Ahy13g2126 1237 Pfam Ring finger domain 1118 1160 IPR001841 -
Ahy13g2126 1237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1114 1163 IPR013083 -
Ahy13g2126 1237 SUPERFAMILY RING/U-box 1116 1165 - -
Ahy13g2126 1237 SUPERFAMILY CHY zinc finger-like 985 1046 IPR037274 GO:0008270
Ahy13g2126 1237 SMART ring_2 1119 1160 IPR001841 -
Ahy13g2126 1237 Gene3D - 1190 1231 - -
Ahy13g2126 1237 SUPERFAMILY Zinc hairpin stack 1056 1112 IPR037275 -
Ahy13g2126 1237 CDD RING-H2_Pirh2 1118 1161 - -
Ahy13g2126 1237 Pfam Zinc-ribbon 1166 1223 IPR039512 -
Ahy13g2126 1237 ProSiteProfiles Zinc finger CTCHY-type profile. 1055 1118 IPR017921 -
Ahy13g2126 1237 MobiDBLite consensus disorder prediction 266 286 - -
Ahy13g2126 1237 Gene3D nmb1532 protein domain like 639 871 - -
Ahy13g2126 1237 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 37 1234 - -
Ahy13g2126 1237 Pfam CHY zinc finger 990 1065 IPR008913 GO:0008270
Ahy13g2126 1237 MobiDBLite consensus disorder prediction 266 281 - -
Ahy13g2126 1237 Gene3D nmb1532 protein domain like 297 444 - -
Ahy13g2126 1237 Gene3D nmb1532 protein domain like 50 201 - -
Ahy13g2126 1237 ProSiteProfiles Zinc finger RING-type profile. 1119 1161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2126 Ahy-Chr13 39712934 39720485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2126 51 1237 C2H2 Transcription Factor Family AT3G18290 67.132 0.0 1645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2126 13 39712934 39720485 Ahy3g1831 3 37752701 37760260 hybridization
Ahy13g2126 13 39712934 39720485 Ahy15g2763 15 145006066 145015169 PCT
Ahy13g2126 13 39712934 39720485 Ahy5g2494 5 99903175 99912458 PCT
Ahy15g2763 15 145006066 145015169 Ahy13g2126 13 39712934 39720485 PCT
Ahy5g2494 5 99903175 99912458 Ahy13g2126 13 39712934 39720485 PCT