Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2112 ATGGCTGAATTCACAGCAGATTTGCATAGTTTTAGACCTTCTTTTCCTTTCTTAGATATTAACACTATGGAACTAACAAATGGATTCAAAGGGGTGATGAATGTGAATTCACATATCCTAAACAACAACTCAAGTTTGCATATGCAGGACTTTTTAATGCCTTTCAACACAAGTCACAGCTTCATAAGTTCTCCAGAATCTGAATTTTCAGGCCTTGTCCATTATGTTAATCACAGTGATCTTCCATCTTCACTTACCATATCTTCAGCAGATAATGAAATCCAACAAGGTAAAAAGCGCAAAGCGGTTGATACGCCGGACACCATGTCAGCAAACTCAACTCCTGCAGTATCTGAGAGTGGCAGCAACACAAAAAATAACTATGGAAGAGGGAAGAGAGGAAAAAAGAATGAAACAGAAGAAAAGAAATCAAAGGAAGTAGTTCATGTTAGAGCAAGAAGAGGCCAAGCTACTGATACTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAACTTAAATTCTTACAGAACATTGTCCCGGGATGTTATAAGACTATGGGAATGGCAATAATGTTGGAAGAGATCATAAACTATGTTCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTTAATGCAGCAAGTGCTTTCTATGACTTCAACTCACAGACAGATGCTTTCGAAACAGTGCTGAGAGCAAGGGCATCAGAAGCAAAAGAGTTGGCGAAGAATGAGAGAGAGGGACATGGCATTCAACCAACTTGGCCTTATTGCTTTTAA 798 0.3935 MAEFTADLHSFRPSFPFLDINTMELTNGFKGVMNVNSHILNNNSSLHMQDFLMPFNTSHSFISSPESEFSGLVHYVNHSDLPSSLTISSADNEIQQGKKRKAVDTPDTMSANSTPAVSESGSNTKNNYGRGKRGKKNETEEKKSKEVVHVRARRGQATDTHSLAERVRRGKINEKLKFLQNIVPGCYKTMGMAIMLEEIINYVQSLQHQVEFLSMKLNAASAFYDFNSQTDAFETVLRARASEAKELAKNEREGHGIQPTWPYCF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2112 265 MobiDBLite consensus disorder prediction 106 128 - -
Ahy13g2112 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 256 IPR024097 GO:0006355
Ahy13g2112 265 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Ahy13g2112 265 CDD bHLH_AtBPE_like 146 231 - -
Ahy13g2112 265 MobiDBLite consensus disorder prediction 92 159 - -
Ahy13g2112 265 SMART finulus 162 212 IPR011598 GO:0046983
Ahy13g2112 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 206 IPR011598 GO:0046983
Ahy13g2112 265 MobiDBLite consensus disorder prediction 131 159 - -
Ahy13g2112 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 223 IPR036638 GO:0046983
Ahy13g2112 265 Gene3D - 156 219 IPR036638 GO:0046983
Ahy13g2112 265 PANTHER TRANSCRIPTION FACTOR BEE 1 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2112 Ahy-Chr13 39449472 39450930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2112 56 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 49.569 1.39e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy13g2112 HLH 2.80E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2112 - - aprc:113855800 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2112 13 39449472 39450930 Ahy3g1815 3 37527614 37529043 hybridization