Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2100 ATGAATAATTCCACATCAGAGAACCACAATACAGAATCCAAAGAAATGGGCAGCCCAAAGCCCATTTCTACTGGAATTTGTAAAAATGGTTTTATAGTCTCTATTCATGGCGAGGTTGAAGCGAAACATCGATTGCTTTTGGTTCAATGGATATCTACCCTTCTTCCTTCACTGAACTTACCGATAAATATCACGGACGATGTCTTAAGAGCATGCTTGAGGGATGGTATCGTTTTGTGTCAGATACTGAACAAGCTTCGTCCAGGTTCCGTCCCGGTGGTTAGTGAATTTGATCATGAAGAAAATCTAAAATCGTTTCTGAAAGCTATGGATGCATTGGGATTGCCTCAGTTTTCAATATCAGACCTGGAGAAGGGATCCATGAAGGTCGTTGTGGATTGCTTGTTATCACTCCGAGCAAAGAGTTTGCAGAATGTTTTCTGGGATAACAATTCTTCTACCACTAATTCCAAAGTAGGAAGCCCTCACGGGATTACAGCTCCCAGTGTTCCATTTCCACCATCATCCGAGACGACCACAAAGCACCATCGTTCCCTGAGTAGCCCATTCTTGACAGAGTCACCAACTTCATTACTGCACCAGGGTCACAAGTTCCACGAGGGATACGAGGTGTTTCAAGGGAAAGAAGAAAGTTACGCAGATCTTTCTCCAACAAAAATATCAGAAATGGTGAAATCAGTCAGTTTAGACAATGCTCCAACTCAGTCACTTCTGGGTGTTGTGAATGGTATTCTTGAAGAAACCGTTGAAAAACGAAACGGTGAAATGCCTTATCGCGTCGCCTGCTTGTTGAGAAAAGTTTCCCAGGAGCTTGAGCGCCGCATGTCAGCCCAAGCAGAACATTCAAGAACTCAAAGCAATCTTTTCAAGGTTCGTGAAGAAAAGTATCAATCCAGAATTAGAGCACTTGAGGCGCTTGCGGTTGGAAATAATATAGAAGAGGATGAGATCATTGCTAGCCAGCTTCATCTGCGAAAAGCTGAGAAGTTCGCAGTGGAAGAAAATAAGCCTGATGACAGGGATTTTGAAAGGTCCATGAAAAAGCAGGAGGACAAAATTTTGGAAATTTCAGCATTGACCGAAGATTTAGAAACAAGCAAAAAAGCACTTGAATTAAAATGCTCACGATTAGAAGTAGAGGCTATGGAAGCTAAAGCAGAAATAGAACAGAAAACTAAAGCATATGAGCAGCAATTAGAAGAATGGCGCAATAAGTGTAAAGAGCTTGAGTCTTCTTATGTTTCAAAATATAACGAGTGGAACATGAAAAAGAACCAGATGCTAAACGTTGTAACTTTTCAATCTAGTAAGCTAGAGATAATGAAATTATCTTGGGAGTCCATTAAGCAAGATGTTATGCAAGAGCAAAAGGTTTATGCAGAGGAGTGTAATCAGTTAGGTGTAAACCTTAAATCACTGGCGCATGCAGCCGAGAACTATCAGGTTGTTGTGGCTGAAAATCGAAAATTGTTCAATGAAATCCAAGAATTAAAAGGAAACATCAGAGTGTATTGTCGCATTAAACCATTTACTGCTGGGGCCAAAGAAAAACAGTCCATTATAGAACACATTGGAGAAGATAATTTGGTTGTGGCAAATCCCTCTAAGCAAGGGAAAGATGCTCTCCGGTCATTCAAATTCAACAAGGTTTTCGGGCCTGACGCAACTCAAGCGGATGTATACGCCGACATACAGGCACTTACAAGATCAGTTCTTGATGGATATAATGTATGCATATTTGCTTACGGTCAAACTGGTTCAGGGAAAACTTACACAATGACTGGTCCAACCGGAGCAACTAGCGAGAATCTTGGTGTTAATTATCGGGCTCTGAATGATCTTTTCAGACTTTCCACGAGTAGAACGAGCTCCATTGAGTATGAGATCGGAGTTCAAATGGTTGAGATATACAATGAGCAAGTGCGCGATTTGTTATTAAATGTTGGGATACTTACTCACTCGCAGCCAGAAGGATTGGCAGTGCCTGATGCAAGCATGTTCCATGTTAATGCGCCTTCAGATGTGATTAAGCTAATGGACATTGGACTAAAAAATAGAGCCATAAGCGCTACTGCCATGAATGAAAGAAGTAGCCGTTCACACAGTGTGGTGACGATTCATGTTCGAGGGAAAGATTTGAACTCGGGTTCTACACTGGTTGGTAATCTTCATTTGGTGGATTTGGCAGGAAGCGAAAGGGTAGATCGGTCTGAAGTAACCGGAGATAGGCTTAGGGAGGCACAACATATAAACAAATCACTGTCTGCATTTGGAGATGTGATCTTTGCCCTCTCCCAAAAGAGCTCTCATGTGCCATATAGAAACAGCAAGCTCACTCAGCTACTCCAAGCTTCTCTTGGTGGTCACGCAAAGACGCTCATGTTTATCCAAATCAACTCCGACGTGAATTCGTATTCCGAAACAATGAGTACTCTCAAGTTTGCTGAAAGGGTTTCTGGAATTGAGTTAGGAGCTGCACGAAGTAATAAAGAGAGCAAGGATGTGAAAGAATTAATGGAACAGGTGGCTTCTCTGAAGAACAGTGTGTCGAAAAAAGACGAGGAGATTGAGCGGCTACAATTACTTCACTTTAAGCAACTCCAAAGACCAAGCACAAGCAGAAGTCCGAGGGATGAATCTCTCCGACGAACGAAATCCTCTATTGGAGGAGACAAAACTCCTCGGGAAAGCTGGAGTTACACAGATGCAGACTTTGATGAAAGATCCAACAATAATTCTGATTATGGTTATGGTTCTGAAAGCTCAAAATCATCAGATAAGATGGACAAACCGAAAACATTACAAAGAAGCGTTCAATCGATGAAGAAAGCATCAGTGCGAGTCCCATCTCCCACGAAAACACAAAGGGACCCTCCTAAGATGTCACCAGCTCCAGGTATAAGGAAAAGCGCCAGTATTGGCCACCTAAGACAACCAGGTTCAAAACGGTGGCAGTAA 2979 0.4216 MNNSTSENHNTESKEMGSPKPISTGICKNGFIVSIHGEVEAKHRLLLVQWISTLLPSLNLPINITDDVLRACLRDGIVLCQILNKLRPGSVPVVSEFDHEENLKSFLKAMDALGLPQFSISDLEKGSMKVVVDCLLSLRAKSLQNVFWDNNSSTTNSKVGSPHGITAPSVPFPPSSETTTKHHRSLSSPFLTESPTSLLHQGHKFHEGYEVFQGKEESYADLSPTKISEMVKSVSLDNAPTQSLLGVVNGILEETVEKRNGEMPYRVACLLRKVSQELERRMSAQAEHSRTQSNLFKVREEKYQSRIRALEALAVGNNIEEDEIIASQLHLRKAEKFAVEENKPDDRDFERSMKKQEDKILEISALTEDLETSKKALELKCSRLEVEAMEAKAEIEQKTKAYEQQLEEWRNKCKELESSYVSKYNEWNMKKNQMLNVVTFQSSKLEIMKLSWESIKQDVMQEQKVYAEECNQLGVNLKSLAHAAENYQVVVAENRKLFNEIQELKGNIRVYCRIKPFTAGAKEKQSIIEHIGEDNLVVANPSKQGKDALRSFKFNKVFGPDATQADVYADIQALTRSVLDGYNVCIFAYGQTGSGKTYTMTGPTGATSENLGVNYRALNDLFRLSTSRTSSIEYEIGVQMVEIYNEQVRDLLLNVGILTHSQPEGLAVPDASMFHVNAPSDVIKLMDIGLKNRAISATAMNERSSRSHSVVTIHVRGKDLNSGSTLVGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSAFGDVIFALSQKSSHVPYRNSKLTQLLQASLGGHAKTLMFIQINSDVNSYSETMSTLKFAERVSGIELGAARSNKESKDVKELMEQVASLKNSVSKKDEEIERLQLLHFKQLQRPSTSRSPRDESLRRTKSSIGGDKTPRESWSYTDADFDERSNNNSDYGYGSESSKSSDKMDKPKTLQRSVQSMKKASVRVPSPTKTQRDPPKMSPAPGIRKSASIGHLRQPGSKRWQ* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2100 992 Gene3D - 35 143 IPR036872 -
Ahy13g2100 992 CDD CH 47 143 IPR001715 GO:0005515
Ahy13g2100 992 MobiDBLite consensus disorder prediction 1 18 - -
Ahy13g2100 992 PRINTS Kinesin heavy chain signature 778 799 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 PRINTS Kinesin heavy chain signature 698 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 PRINTS Kinesin heavy chain signature 581 602 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 PRINTS Kinesin heavy chain signature 729 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 PANTHER KINESIN-LIKE PROTEIN KLP-3 919 992 - -
Ahy13g2100 992 MobiDBLite consensus disorder prediction 155 191 - -
Ahy13g2100 992 MobiDBLite consensus disorder prediction 1 21 - -
Ahy13g2100 992 Coils Coil 835 869 - -
Ahy13g2100 992 Coils Coil 367 426 - -
Ahy13g2100 992 Pfam Calponin homology (CH) domain 46 139 IPR001715 GO:0005515
Ahy13g2100 992 MobiDBLite consensus disorder prediction 171 191 - -
Ahy13g2100 992 MobiDBLite consensus disorder prediction 874 992 - -
Ahy13g2100 992 MobiDBLite consensus disorder prediction 882 897 - -
Ahy13g2100 992 SMART kinesin_4 505 836 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 SMART ch_5 43 141 IPR001715 GO:0005515
Ahy13g2100 992 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 919 992 - -
Ahy13g2100 992 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 4 344 - -
Ahy13g2100 992 MobiDBLite consensus disorder prediction 941 964 - -
Ahy13g2100 992 Gene3D - 346 387 - -
Ahy13g2100 992 PANTHER KINESIN-LIKE PROTEIN KLP-3 4 344 - -
Ahy13g2100 992 PANTHER KINESIN-LIKE PROTEIN KLP-3 357 870 - -
Ahy13g2100 992 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 357 870 - -
Ahy13g2100 992 Pfam Kinesin motor domain 513 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy13g2100 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 866 IPR027417 -
Ahy13g2100 992 SUPERFAMILY Calponin-homology domain, CH-domain 39 139 IPR036872 -
Ahy13g2100 992 Gene3D Kinesin motor domain 449 830 IPR036961 -
Ahy13g2100 992 ProSiteProfiles Calponin homology (CH) domain profile. 41 143 IPR001715 GO:0005515
Ahy13g2100 992 ProSiteProfiles Kinesin motor domain profile. 507 828 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2100 Ahy-Chr13 38917019 38923236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2100 396 862 Calmodulin-binding Proteins AT5G65930 35.294 1.76e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2100 K10406 - jre:108983676 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2100 13 38917019 38923236 Ahy3g1807 3 37129943 37135929 hybridization
Ahy13g2100 13 38917019 38923236 Ahy15g2798 15 145723779 145731954 PCT
Ahy13g2100 13 38917019 38923236 Ahy5g2466 5 99350785 99359116 PCT
Ahy15g2798 15 145723779 145731954 Ahy13g2100 13 38917019 38923236 PCT
Ahy5g2466 5 99350785 99359116 Ahy13g2100 13 38917019 38923236 PCT