Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2099 ATGAGATTAAGCTGCAACGGTTGCCGAGTGCTGCGAAAGGGATGCAGCGGGGAATGCCCGATCAGGCCATGCCTTCAGTGGATAAAGTCGCCGCAGTCGCAGGCCAACGCCACCCTCTTCCTGGCCAAATTCTACGGCCGCGCCGGCCTCATCAACCTCATCCATGCGGCCGCACCGCATCTACGACCAGCGGCGTTTAAGTCGCTGCTCCACGAAGCGTGCGGGAGGATCGTGGAGCCCATTCTTGGGTGCACGGGGTTGCTGTCGTCGGGGCGGTGGGACCTTTGCGAGGCGGCCGTGGAGGCCGTTTTGAGTGGGTCCCCAATCGGGAAGGTGTCGTTGTGGTGTGAGTCTGCGGGTTCTTCCATGCTGAAGGCGTGCGATATAAGACACGTGGCTAATAAGGGAATGAAGAGTGGGTTGCACAAGGTGAAGGAGAGCAGTAAGGGTTTCAAACGGAACGGAGGAGGAAAAGGGAAGAGAGGGAAGGAGATTGCTGACGTCAGCGACGACGACTGGGCTTCTGGACTGAGTGACCATAGAAGTTTAGTTAACGGTAATGGTGATAGCTGCTCCGTGGAAACCGAGACGGACACGGTGGAGGCTGCAGAAGCGTGTGACGGAGGCTTGGACCTCAACTTGACTTTGGGGTGTTTCTCGTCTTAA 666 0.5766 MRLSCNGCRVLRKGCSGECPIRPCLQWIKSPQSQANATLFLAKFYGRAGLINLIHAAAPHLRPAAFKSLLHEACGRIVEPILGCTGLLSSGRWDLCEAAVEAVLSGSPIGKVSLWCESAGSSMLKACDIRHVANKGMKSGLHKVKESSKGFKRNGGGKGKRGKEIADVSDDDWASGLSDHRSLVNGNGDSCSVETETDTVEAAEACDGGLDLNLTLGCFSS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2099 221 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Ahy13g2099 221 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Ahy13g2099 221 MobiDBLite consensus disorder prediction 145 165 - -
Ahy13g2099 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 206 - -
Ahy13g2099 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2099 Ahy-Chr13 38840952 38842010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2099 1 216 AS2 family AT3G02550 46.121 4.36e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy13g2099 LOB 9.50E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2099 - - ahf:112802215 219.935