Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2063 ATGGTTGATAATGGTGTCTCTGATTCCTTATTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACACTTTGTTGATTCCATATCAGGGAAGACATTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGTGAAGATCAGTGAGGGAACTAAAGAAGACATTGATGCTGCTGTTGCAGCGGCGCGTGAGGCATTTGACACTGGTCCATGGCCCCGCATGACCGGAGTTGAAAGAGCAAAAATTATGGTGAAATGGGCAGAGCTTATTGAAGAAAATGGAGAAGAATTAGCGGCATTGGACACCATTGAAGCTGGTTTGCTATACCAATTAACCAAGTTTGGGATTCCCGCAGCAGCGGATATGTTGCGGTACTATGCTGGTGCTGCTGACAAGATTCATGGGGAGGTATTGAAGAGTTCTGGACAGTTCCATGCATACACATTAATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTTCCTCTTATGATGTTCTTCACCAAGGTTGCACCTTCCATTGCAGCTGGCTGCACCATGGTCCTCAAACCCGCTGAACAGACCCCTCTCTCTGCTTTATTTGTTGCTCATCTAGCTAAGCTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTACCGGGATTCGGTCCGACTGCAGGTGCTGCAATAAGCTCACACATGGAGATTGATAAGGTTAGCTTTACCGGTTCAGTTGAAACAGGGCGTGAAGTGATGCATGCGGCAGCTAGTAGCAATTTGAAGGCGGTTTCACTTGAATTAGGTGGCAAGTCTCCCCTCATTATTTTTGATGATGCTGATCTTGACAAAGCCGCTGACCTTGCATTCTTCGGCATGTTCTTGAACAAGGGAGAAATATGTGCTGCTGGTTCTCGTGTGTACGTTCAGGAAGGGATCTATGATGAGCTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAAACCAACCAAGGACCTCAGGCTGACAAGAACCAATTTGATAAAATTCTTTCCTACATTGAGCATGGAAAGAAAGAGGGAGCTACTCTTTTGACCGGGGGTAAATCCATCGGCACCAAGGGCTACTTCATTGAACCTACAATTTTCTCTCATGTAAAGGAGGACATGCGTATAACTCAGGATGAAATATTTGGCCCCGTGATGACGTTAATGAAGTTTAAGACAATTGAGGAAGCCATTAAGAGGGCAAACAATACAAGATACGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGCGCAGGCATTGTTTGGATCAATTGCTATTTGATTCTTGAGAGTGACATTCCTTTTGGAGGGTACAAGATAAGTGGATTTGGTGGAAAAGATCTCGGTTTGAATGCACTTCACAAGTACTTGCAACTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCATTGA 1500 0.4453 MVDNGVSDSLFKMPTIKFTKLFINGHFVDSISGKTFETIDPRTGEVIVKISEGTKEDIDAAVAAAREAFDTGPWPRMTGVERAKIMVKWAELIEENGEELAALDTIEAGLLYQLTKFGIPAAADMLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNVPLMMFFTKVAPSIAAGCTMVLKPAEQTPLSALFVAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMEIDKVSFTGSVETGREVMHAAASSNLKAVSLELGGKSPLIIFDDADLDKAADLAFFGMFLNKGEICAAGSRVYVQEGIYDELEKKLVEKAKAWVVGDPFDPKTNQGPQADKNQFDKILSYIEHGKKEGATLLTGGKSIGTKGYFIEPTIFSHVKEDMRITQDEIFGPVMTLMKFKTIEEAIKRANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLILESDIPFGGYKISGFGGKDLGLNALHKYLQLKSVVTPIYNSPWH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2063 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 498 - -
Ahy13g2063 499 SUPERFAMILY ALDH-like 11 495 IPR016161 GO:0016491
Ahy13g2063 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Ahy13g2063 499 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 7 498 - -
Ahy13g2063 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 292 303 IPR016160 GO:0016491
Ahy13g2063 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 264 271 IPR029510 GO:0016491
Ahy13g2063 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
Ahy13g2063 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 457 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2063 Ahy-Chr13 37603569 37617894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2063 12 498 Aldehyde Dehydrogenase Gene Family AT3G24503 70.552 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2063 K12355 - gmx:100783920 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2063 13 37603569 37617894 Ahy3g1778 3 35199335 35204490 hybridization
Ahy13g2063 13 37603569 37617894 Ahy15g2866 15 147414338 147423347 PCT
Ahy13g2063 13 37603569 37617894 Ahy5g2412 5 98144457 98156713 PCT
Ahy15g2866 15 147414338 147423347 Ahy13g2063 13 37603569 37617894 PCT
Ahy5g2412 5 98144457 98156713 Ahy13g2063 13 37603569 37617894 PCT