Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2062 ATGACTGAACTCACTAATAATGGCCGTGACTGCTCTTCCGTCACCGTCAAGTTCACCAAGCTATTCATTAATGGGCAGTTTCTTGATTCAGTTTCAGGGAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTGATAACAAGAATTAGCGAGGGAACCAGAGAAGACATAGATATTGCTGTTAAGGCTGCACGCCACGCATTTGACTTTGGTCCATGGCCTCGCATGCCTCCCTCTGAGAGAGCAAAGATTATGATGAAATGGGCAGAACTAATTGATGAAAACGTGGAAGAACTTGCGGCACTAGATACTATTGATGCTGGAAAATTGTATCATATGTGCAAGGCTGTGGACATTCCTACAGCATCAAACACTCTACGCTACTATGCTGGTGCTGCTGACAAAATCCATGGGGAGGTGTTAAAGATGTCTGGGAAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCATGGAATTTCCCAACCACCATGTTCTTCCTTAAAGTTAGCCCTTCCTTGGCTGCAGGCTGCACCATGGTACTCAAGCCTGCAGAGCAGACACCACTCTCTGCTCTGTTTTATGCTCATCTAGCCAAACTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTTCCCGGATTCGGTCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAAGTTAGCTTCACAGGTTCAACAGAAGTAGGGCGTGAAATAATGCAAGCTGCAGCAAAGAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAATCACCTCTCATTATCTTTGATGATGCTGATATTGACAAAGCTGCTGACCTTGCTCTCTTGGGCATCCTATTTAACAAGGGAGAAGTCTGTGTTGCAAGTTCGCGTGTGTTTGTTCAGGAAGGTATCTACAATGAATTTGAAAAGAAGCTGGTAGAGAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGACCCTAAATCTCAGCAAGGACCGCAGGTTGACAAGAACCAATTTGAAAAAGTCCTTTCCTACATTGAACATGGAAAGAGACAAGGTGCTACCCTGTTGACTGGGGGTAAAACACTGGGCAACAAGGGCTATTACATTCAACCAACAATTTTTTCTGATGTGAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTCATGGCACTCAAGAAGTTCAGGACGATTGAGGAAGCAATTAAGAGTGCAAACAACACAAGATATGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCACGGTCCATTCGTGCAGGGACTATTTGGATCAATTGCTACTTTGCGTTTGGGGATGATGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTCCGGATTGGATGCACTTCACAAATACCTACAAGTTAAATCTGTTGTCACACCTATTTACGATTCTCCTTGGCTTTGA 1500 0.4387 MTELTNNGRDCSSVTVKFTKLFINGQFLDSVSGKTFETIDPRTGEVITRISEGTREDIDIAVKAARHAFDFGPWPRMPPSERAKIMMKWAELIDENVEELAALDTIDAGKLYHMCKAVDIPTASNTLRYYAGAADKIHGEVLKMSGKFHAYTLMEPIGVVGHIIPWNFPTTMFFLKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAADLALLGILFNKGEVCVASSRVFVQEGIYNEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKNQFEKVLSYIEHGKRQGATLLTGGKTLGNKGYYIQPTIFSDVKEDMLIAQDEIFGPVMALKKFRTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDSGLDALHKYLQVKSVVTPIYDSPWL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2062 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Ahy13g2062 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Ahy13g2062 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Ahy13g2062 499 SUPERFAMILY ALDH-like 14 495 IPR016161 GO:0016491
Ahy13g2062 499 Pfam Aldehyde dehydrogenase family 30 489 IPR015590 GO:0016491
Ahy13g2062 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Ahy13g2062 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 499 - -
Ahy13g2062 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 13 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2062 Ahy-Chr13 37580880 37595667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2062 7 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.400 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2062 K12355 - gmx:100811540 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2062 13 37580880 37595667 Ahy3g1777 3 35186793 35199155 hybridization
Ahy13g2062 13 37580880 37595667 Ahy15g2871 15 147614320 147624227 PCT
Ahy13g2062 13 37580880 37595667 Ahy5g2411 5 98123714 98134130 PCT
Ahy15g2871 15 147614320 147624227 Ahy13g2062 13 37580880 37595667 PCT
Ahy5g2411 5 98123714 98134130 Ahy13g2062 13 37580880 37595667 PCT