Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2043 ATGGGGGAAGGAGAAGGAGGTGATTGCGCTTTGAGAAATGTGGCATCGGATGCACCTACGGTGCCGGTGCTGGTGCCGCCGTCGGATATTCCCGCCAAGAAGCTTGCAAGGCAGCTTGATTTCACCGGCTTAGCCGGGATGCCGGGCGGCGCGCCATTTCCAGAGAACTCGCAGTTGCGGCAGCAACAGCAACAACAGCTTCAGCCGCAAGTGGTGGCACAGTCACAGTCACGGTCACATCCGCAGACAATGACGCAGCCGATGGTAATGATGCCGATGCCGCATCCGCCGCAGGCGCCACGCCTTTCAACGAGGGTTGGTAAATCAGAATCTCCAAAACCAAGATCAAGGACCAATTTTGAAACAAAAGAAGCTACTCCAAAGAAGCAAAAGCAATGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATACTGTGATGGTTGCAACTGTGTAAATTGTTACAACAATGTTGATAATGAAGCAGCCAGACGAGAAGCTGTTGGAGCTACCTTAGAACGTAATCCAAATGCATTTAGGCCAAAGATTGCGAGCAGCCCTCATGGACCACATGACAACAGGGAGGATGCTGGCGAAGTTGTTATATTGGGAAAGCACAATAAGGGATGTCATTGTAAAAAGTCTGGCTGCCTCAAGAAGTACTGCGAGTGTTTCCAAGCCAACATTCTTTGTTCCGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAAGCATTGTTCCATGGAGATCAAAATATCAACATGACATATATTCAGCAAGCAGCAAATGCTGCAATAACTGGTGCTATCGGTTCCTCTGGCTTTTCATCACCGCCAGTATCAAAGAAAAGAAAAGGTCAGGAACTCTCTTTTGTGCCAACAGCCAAGGATCCATCCATTGGAAAGCTAGGAAAACAGGCAAACCATGTCAAAGGTCCTTTACCCTCCTCCTCCTTTTCTCCTGCCCCTAGTACTCATGTTGGAACTGCAACATTAGGTCCTTCAAAATTTATATACCGGTCTGTATTGGCAGACATACTACAACCAGAGCACTTGAAGGAGCTTTGTTCAGTCCTAGTGCTACTATCTGGACAAGCCGCGAAGACAGTAACAGACCAGAAAAATATAATGCACAAACATATAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAACAACAGTTACCAAGCCAAAAGGGAACTAATGTTGAGAAAGCTACGTCTGGTGATTGTTCAAGTGAGAACCGAATAGATAAGGTCAGCCCAGATAATTCTAGTTCAGACGGTGTTGGTGTCCTCAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCGATGAGCATGATACAATGTTTATGACTGCTGTCTCTCCTAGTGAGCCAATTTCTCACACTTGTAACATATCTTCTCAATTGCCTTGTGGACAAAAAATGACTGAGTTATATGCAGAGCAAGAAAAGATTGTTTTGACAAAGTTCAGAGATTTTCTTAATAGAGTTATCACTATGGGAGAAATAAATGAAACAAAATATTCTTCATTAGCCAGAAGTGAATTGGAGAGTCATAGGGACCCAGTGGTCAATGGCACTGAAAATGCTAGAACTGAGACAGTAGATGAAGGAGCCACTAAAATTGGTGTTGCCAAAGCTGTTGTTCATCCTCTGGCGACAAGTAGGAATTTGACTAATTCAATATCTTTGGTCCATAGTAATCTTGTTCCTGAAAATGGTGAAAAAGAGGTATGA 1800 0.44 MGEGEGGDCALRNVASDAPTVPVLVPPSDIPAKKLARQLDFTGLAGMPGGAPFPENSQLRQQQQQQLQPQVVAQSQSRSHPQTMTQPMVMMPMPHPPQAPRLSTRVGKSESPKPRSRTNFETKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVDNEAARREAVGATLERNPNAFRPKIASSPHGPHDNREDAGEVVILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNINMTYIQQAANAAITGAIGSSGFSSPPVSKKRKGQELSFVPTAKDPSIGKLGKQANHVKGPLPSSSFSPAPSTHVGTATLGPSKFIYRSVLADILQPEHLKELCSVLVLLSGQAAKTVTDQKNIMHKHIEDQTETSLASSTQQQLPSQKGTNVEKATSGDCSSENRIDKVSPDNSSSDGVGVLKGRPMSPGTLALMCDEHDTMFMTAVSPSEPISHTCNISSQLPCGQKMTELYAEQEKIVLTKFRDFLNRVITMGEINETKYSSLARSELESHRDPVVNGTENARTETVDEGATKIGVAKAVVHPLATSRNLTNSISLVHSNLVPENGEKEV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2043 599 PANTHER TESMIN/TSO1-RELATED 86 572 IPR028307 -
Ahy13g2043 599 MobiDBLite consensus disorder prediction 397 452 - -
Ahy13g2043 599 SMART CXC_2 128 168 IPR033467 -
Ahy13g2043 599 SMART CXC_2 213 254 IPR033467 -
Ahy13g2043 599 MobiDBLite consensus disorder prediction 1 127 - -
Ahy13g2043 599 PANTHER TESMIN/TSO1-RELATED 28 99 IPR028307 -
Ahy13g2043 599 MobiDBLite consensus disorder prediction 400 444 - -
Ahy13g2043 599 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 86 572 - -
Ahy13g2043 599 MobiDBLite consensus disorder prediction 108 127 - -
Ahy13g2043 599 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 216 250 IPR005172 -
Ahy13g2043 599 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 130 165 IPR005172 -
Ahy13g2043 599 MobiDBLite consensus disorder prediction 55 86 - -
Ahy13g2043 599 ProSiteProfiles CRC domain profile. 129 253 IPR005172 -
Ahy13g2043 599 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 28 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2043 Ahy-Chr13 37019984 37024923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2043 30 538 CPP Transcription Factor Family AT4G29000 55.224 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy13g2043 TCR 3.20E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2043 - - gmx:100777698 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2043 13 37019984 37024923 Ahy3g1758 3 34617863 34622766 hybridization