Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2013 ATGGCTTGTTCGATTCGTCCCACTCTCTCTTCGTTTCGCTTTTCAACCGTTGCTTCTCGTTCTCTCTCCCGCCCCTTCCTCCGCCTTCCCTCTATCACTACCAGAGCATTAGGTGAATCCAATAGATTGAGAGCAACGAGGATGGTGAGGCGAGATGGGAATTTCATGAGAGTGATGGCTTCCCAAGCAAGCACCGCTGCTTCCCCCGAGAACACACTCGAATGGGTCAAGCAAGATAAGCGAAGGATGCTTCATGTTGTCTACCGTGTTGGCGATTTGGACAGGACTATCAAGTTTTATACAGAGTGCCTGGGAATGAAGCTCCTCAGGAAGCGTGACATACCTGAGGAGAGATATACTAATGCCTTTCTTGGATATGGCCCCGAAGATTCGCACTTTGTTATTGAACTCACTTACAATTATGGAATTGACAAGTATGACATTGGAGCTGGATTTGGACATTTCGGCATTGCTGTTGATGATGTTGCAAAAACAGTGGAACTAATAAGAGCGAAGGGTGGCAAGATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAGCACGGTCATTGCATTCATTGAAGATCCTGATGGCTACAAATTTGAACTTTTGGAAAGAGGCCCCACTCCCGAGCCCTTGTGCCAAGTGATGCTTCGAGTCGGTGATCTTAAGCGTTCCATAGAATTTTATGAGAAGGCTTTTGGTATGGAGCTCCTTCGCACTCGAGATAATCCAGAATACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTGGAATTGACTTACAATTATGGAGTCAAAGAATATGATAAAGGAAATGCTTATGCTCAGATAGCAATAGGCACAGATGATGTGTACAAAACCGCAGAAGCTGTTAAGTTAGCTGGAGGAAAGATTACTCGGGAACCTGGACCACTGCCTGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTCCTTAAGGAGTTGGAGTAA 1035 0.4493 MACSIRPTLSSFRFSTVASRSLSRPFLRLPSITTRALGESNRLRATRMVRRDGNFMRVMASQASTAASPENTLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGIDKYDIGAGFGHFGIAVDDVAKTVELIRAKGGKITREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLKRSIEFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGVKEYDKGNAYAQIAIGTDDVYKTAEAVKLAGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2013 344 CDD GlxI_Ni 83 204 - -
Ahy13g2013 344 ProSitePatterns Glyoxalase I signature 1. 85 106 IPR018146 GO:0004462|GO:0046872
Ahy13g2013 344 Gene3D - 209 344 IPR029068 -
Ahy13g2013 344 ProSitePatterns Glyoxalase I signature 1. 215 236 IPR018146 GO:0004462|GO:0046872
Ahy13g2013 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 82 206 IPR037523 -
Ahy13g2013 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 212 336 IPR037523 -
Ahy13g2013 344 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 24 344 - -
Ahy13g2013 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 213 336 IPR029068 -
Ahy13g2013 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 82 208 IPR029068 -
Ahy13g2013 344 CDD GlxI_Ni 213 334 - -
Ahy13g2013 344 PANTHER LACTOYLGLUTATHIONE LYASE 24 344 - -
Ahy13g2013 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 83 203 IPR004360 -
Ahy13g2013 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 215 330 IPR004360 -
Ahy13g2013 344 Gene3D - 53 207 IPR029068 -
Ahy13g2013 344 TIGRFAM glyox_I: lactoylglutathione lyase 70 215 IPR004361 GO:0004462|GO:0046872
Ahy13g2013 344 TIGRFAM glyox_I: lactoylglutathione lyase 213 336 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2013 Ahy-Chr13 36028170 36031742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2013 215 333 Calmodulin-binding Proteins AT1G08110 28.966 1.98e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2013 K01759 - gmx:100780463 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2013 13 36028170 36031742 Ahy13g2013 13 36028170 36031742 ECH
Ahy13g2013 13 36028170 36031742 Ahy3g1734 3 33969059 33972647 hybridization
Ahy13g2013 13 36028170 36031742 Ahy15g2921 15 149077751 149081732 PCT
Ahy13g2013 13 36028170 36031742 Ahy5g2349 5 96739570 96743510 PCT
Ahy15g2921 15 149077751 149081732 Ahy13g2013 13 36028170 36031742 PCT
Ahy5g2349 5 96739570 96743510 Ahy13g2013 13 36028170 36031742 PCT