Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1997 ATGGACGAGGAAGAGCAGCTCCAGCGACACGACTCCGAGTTGTCCGCCACCAGTTCCAGCTCCGGCATTTCCTCAATCCTCAGCTTCGACGACTTCCGCGGCAGTAACACCAGCTCCGGCGACATTTCCTCCATCAGCAGTGGCTCCGGGGAGATTCCTCCCGCCGACGTCATACTCTTGCCTCCTCTGCTCAGGCGGACTGTGTCGAGTGACGTGGAGGTTGTGGTAGCGGCAGCGGTCAGGGATAAATGCGTGGGGAGGAAGAACAAGGGAGTGAGTTGGGGGCACACTTCGGTGATTGGGAGAAGGAAGGAGATGGAAGACACGATTGCCGTTATTCCTGGATTCATGTCCCGCGCGTGCCACCACGTCGGCGGTTGTACGGCCCCTGGCTCCCAATCCTCCGGCGAGATCTCTCCCCTTCATTTCTTCGGAGTGTACGACGGTCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCAAATCGGATGCACGATGTGATAGCAGAGGAATGGGAGCGGCAAATAGAGAGTTATAGTGAATGGCAAAGAAGGTGGGAGGCCGTATTTTCTAACGGTTTTGAAAGGACTGACAATGAGATATCATCAGATGAAGTTGCACCTGAAATGGTAGGATCTACAGCCTCTGTGGTGGTTCTGTCTGGTTGCCAAATTATTACATCCAACTGCGGCGATTCAAGGGTCGTTCTTTGCCGCAGGGCTCAAACAATCCCACTCACTGTCGATCAGAAGCCTGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCTATAGGTGATAGGTACTTGAGGCCATGGATCATTCCAGTGCCTGAGATAACCTTTACAGCAAGAAGTGAGGAGGATGAGTGCTTAATATTGGCAAGTGATGGACTCTGGGATGTCATGACGAATGAAGAGGTTGGTGAAGTTGCGCGGCATATTCTAAGAAGGCGACGAAGGTCCCTGTCTCTGGAGGAAATATCTCCGGCACAAGTTGTTGCCAATAGCCTGACTGAGATTGCTTATGCTAGAAATAGTAAGGATAACATTTCAATCATAGTAGTTGATCTGAAATCGAAGAGAAAACGTCAACCAAGGCCTCCTTTAGTTGCCCGAGAAGCCAACTACCTATAA 1197 0.5088 MDEEEQLQRHDSELSATSSSSGISSILSFDDFRGSNTSSGDISSISSGSGEIPPADVILLPPLLRRTVSSDVEVVVAAAVRDKCVGRKNKGVSWGHTSVIGRRKEMEDTIAVIPGFMSRACHHVGGCTAPGSQSSGEISPLHFFGVYDGHGGSQVAKFCANRMHDVIAEEWERQIESYSEWQRRWEAVFSNGFERTDNEISSDEVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRAQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARSEEDECLILASDGLWDVMTNEEVGEVARHILRRRRRSLSLEEISPAQVVANSLTEIAYARNSKDNISIIVVDLKSKRKRQPRPPLVAREANYL* 399
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1997 398 MobiDBLite consensus disorder prediction 1 24 - -
Ahy13g1997 398 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Ahy13g1997 398 CDD PP2Cc 95 378 IPR001932 -
Ahy13g1997 398 Pfam Protein phosphatase 2C 102 371 IPR001932 -
Ahy13g1997 398 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 54 387 - -
Ahy13g1997 398 SUPERFAMILY PP2C-like 87 379 IPR036457 -
Ahy13g1997 398 Gene3D - 80 387 IPR036457 -
Ahy13g1997 398 SMART PP2C_4 83 376 IPR001932 -
Ahy13g1997 398 PANTHER ALPHABET, ISOFORM E-RELATED 54 387 - -
Ahy13g1997 398 ProSiteProfiles PPM-type phosphatase domain profile. 93 378 IPR001932 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy13g1997 Ahy-Chr13 35273843 35280187 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1997 94 388 PP2C-type Phosphatase Gene Family AT4G26080 49.841 1.60e-97 296
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1997 K14497 - gmx:100793293 610.912
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1997 13 35273843 35280187 Ahy13g1997 13 35273843 35280187 ECH