Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1970 ATGGGGAGAGCCACAAGGTGGTTTAAGAGCTTGTTTGGGATCAAGAGAGACAAAGAGCGCAGCCATAATTCAAATTCTACCACCAAGTTGTGGGGTTCTTCTCATTCACGCTCAGATTCCGGAGTTTTGTGTCACAATCCGGCAACCATTCCACCCAACATTTCTCCTGCAGAGGCTGCTTGGTTGGAGTCCTTCTACTCCAAAACAGAGAGGGAGCAGAACAAGCATGCCATCGCAGTTGCTGCCGCCACAGCCGCAGCAGCCGATGCAGCAGTGGCTGCCGCTCAGGCCGCTGTGGCAGTTGTGAGGCTAACTAGCCACGGAAGAGACAGCTTGTTTGGTGGGCATGAGAAGTTTGCAGCTGTGAAGATCCAAACCGTTTTTAGGGGATTCTTGGCAAGGAAGGCACTAAGGGCCTTAAAGGGTTTGGTGAAGATACAAGCCATTGTGAGAGGGTACTTGGTGAGGAAGCAAGCAGCAGAAACGCTGCATGGTATGCAGGCTCTTGTTAGAGCTCAGGCTGCAATTCTCTCTCACAAATATGGCCGCGGACTCAGACACATAAGGAATGATGCTTATTGGTTGCCTACACAAGCAAGAAGATCCTTGGAAAGGTTTGATGAGACAAGGACAGAGTATAGAGGTCCAAGCGAGAGCAGAAGGCTATCATCATCATTTGATGCAACAATGAATAGCAGCTATGACGGCAGCCCAAAAATAGTGGAAGTGGACACTGGCAGGCCTAAGTCAAGGTCTCGGAGGACCAACATATCAATGTCTGATTTTGGGGATGACCCTTTGTTTTCATCTCCCTTGCCAGTCCCGTGCCGCGATTGGGGACTAACGGGGGAAGAGGGGAGGTTGTGGACGGCGCAGAGCACGCCGCGCTTGAACAGTTGTAGTTGTGGTGTTTTCATCGATAGTAGCTTGTTGAAAGGGCAACAAGCTCCGAATTATATGGCTAATACAGAGTCATTTAAGGCGAAAAAGAGGTCTCAGAGCGCTCCAAGACAAAGGGGAGAGGCAAGTCCAAGTCCAAGGAACAGTTTGAGTGGGGTTGGGATGTCCAAGATTCATTTAAAGAATGCTGTCATGGCTAAGCTTGAAATGTCCGCAGAGTTTTGTAACCCACACAAGATGAGACACACATAG 1152 0.4957 MGRATRWFKSLFGIKRDKERSHNSNSTTKLWGSSHSRSDSGVLCHNPATIPPNISPAEAAWLESFYSKTEREQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDSLFGGHEKFAAVKIQTVFRGFLARKALRALKGLVKIQAIVRGYLVRKQAAETLHGMQALVRAQAAILSHKYGRGLRHIRNDAYWLPTQARRSLERFDETRTEYRGPSESRRLSSSFDATMNSSYDGSPKIVEVDTGRPKSRSRRTNISMSDFGDDPLFSSPLPVPCRDWGLTGEEGRLWTAQSTPRLNSCSCGVFIDSSLLKGQQAPNYMANTESFKAKKRSQSAPRQRGEASPSPRNSLSGVGMSKIHLKNAVMAKLEMSAEFCNPHKMRHT* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1970 383 Gene3D - 116 168 - -
Ahy13g1970 383 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Ahy13g1970 383 MobiDBLite consensus disorder prediction 324 353 - -
Ahy13g1970 383 MobiDBLite consensus disorder prediction 337 352 - -
Ahy13g1970 383 MobiDBLite consensus disorder prediction 237 264 - -
Ahy13g1970 383 Pfam Protein of unknown function (DUF4005) 291 345 IPR025064 -
Ahy13g1970 383 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Ahy13g1970 383 MobiDBLite consensus disorder prediction 18 37 - -
Ahy13g1970 383 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Ahy13g1970 383 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Ahy13g1970 383 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Ahy13g1970 383 SMART iq_5 139 160 IPR000048 GO:0005515
Ahy13g1970 383 SMART iq_5 116 138 IPR000048 GO:0005515
Ahy13g1970 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1970 Ahy-Chr13 34706135 34708545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1970 1 355 IQD Protein Family AT3G16490 46.891 4.28e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1970 - - adu:107478572 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1970 13 34706135 34708545 Ahy13g1970 13 34706135 34708545 ECH
Ahy13g1970 13 34706135 34708545 Ahy3g1696 3 32764734 32767329 hybridization