Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy13g1961 | ATGTCTTGGCAAACCTACGTGGACGAGCACTTGATGTGCGATATTGATGGCTCAGGCCAGCACCTCACCGCAGCCGCCATCATCGGCCATGACGGTTCTGTCTGGGCCCAGAGCGCAAACTTCCCTCAGGCAAAGAGTCAAGAGATAGCCGACATAATGAAGGATTTCGAAGAACCAGGGCATCTGGCGCCAACAGGGTTGCACATTGCTGGAACCAAATACATGGTGATCCAGGGTGAGCCAGGTGCTGTGATTCGCGGCAAGAAAGGATCTGGAGGGATCACCATTAAGAAAACCGGTCAAGCTCTTGTTTTTGGAATCTATGAGGAGCCTGTAACTCCTGGTCAGTGCAACATGGTCGTTGAGAGGTTGGGCGATTACCTCTCTGATCAGGGTCTCTAG | 402 | 0.5249 | MSWQTYVDEHLMCDIDGSGQHLTAAAIIGHDGSVWAQSANFPQAKSQEIADIMKDFEEPGHLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLSDQGL* | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy13g1961 | 133 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
Ahy13g1961 | 133 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - | |
Ahy13g1961 | 133 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Ahy13g1961 | 133 | PANTHER | PROFILIN | 1 | 133 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 | |
Ahy13g1961 | 133 | PANTHER | PROFILIN | 1 | 133 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy13g1961 | Ahy-Chr13 | 34439868 | 34440795 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy13g1961 | 1 | 133 | Cytoskeleton Gene Families | AT4G29340 | 86.567 | 5.56e-85 | 243 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy13g1961 | K05759 | - | tcc:18588487 | 248.054 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy13g1961 | 13 | 34439868 | 34440795 | Ahy13g1961 | 13 | 34439868 | 34440795 | ECH | |
Ahy13g1961 | 13 | 34439868 | 34440795 | Ahy3g1689 | 3 | 32637669 | 32638688 | hybridization |