Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1944 ATGACCGTGGAGGACCAAATTGACCGGTTCCCCGTGGGTATGCGTGTTCTCGCTGTGGATGATGACCCAACTTGCCTCAAAGTCTTGGAGAATCTCCTTCGCAAATGCCAATACCAAGTTACTACAACTAATCAAGCAATTGAGGCGCTGAGAATGTTGAGGGAAAACAGGAACAAGTTTGACCTCGTCATTAGCGATGTGAATATGCCTGACATGGATGGATTTAAGCTCCTTGAGTTGGTGGGGCTTGAAATGGACTTACCTGTGATCATGTTGTCTGGACACAGTGACACAAAGCTGGTGATGAAGGGTGTTACACATGGTGCAGTTGACTATTTGCTGAAACCTGTTCGGATTGAAGAGCTGAAGAACATTTGGCAACATGTTGTCCGAAGGAAGAACTTTGATCCCAGGGATCAGAATAAGGGTTCCAATGACAAAAGGGGTCCCAATGCTGCTGGGGAAGGTAATCAAAGTATCATATCAGAAGACGGCAGTGACCAGAATAAAAATCTTGGCAAAAAACGAAAGGACCAGACTGAAGAAGAGGAAGATGATGGTGAAGACAATGGGGAGGATAATGATGACCCTTCATCACAAAAGAAGCCTCGTGTTGTTTGGTCTGTCGAGCTTCATAGAAAATTTGTTGCAGCAGTTAATCAACTTGGCCTTGATAAGGCTGTCCCTAAGAAAATACTTGATCTGATGAATGTTGAAGGACTTACTAGGGAAAATGTGGCAAGCCATCTGCAGAAATATAGGCTTTACCTGAAAAAGGCAACCCAGCAAGCTAGCATGGTTGCTGCATTGGGTAATACCGAATCATACCTGAGGATCGGTTCAATAGATGCATATGCAGAGTTTTGCACCTCTTCTGGTTCAGGAAAGATTCCAAACCCTGCATTGCAATCATATGCCTCGAGTGGTATTTTTGGCAGGCTGAATTCCCCAGCTAGCTTGAGCATGAGAGGCATTAGTGCTTCCACTCTAATTCAGCCTCCTGTTCAGCCTCAAAACCTGAACAGCACCTTGAGCCCTCTGGGTAACATTCAGGCATCAATATTTCCGGCAAATCAAACCTCAAGTTTATTGCAAGGAATTCCAACATCAATTGAGCTTAATCAGTCTAAGCAAAACAACTGTACAACAGGTATAACACAAGTAAATCAAGTTAGTTGTAGTGGATTTACTGCTGCCTCTGGCTTCCGTGACCGTAGGCTTACAGTTGGTACAGCAAGCAATGCTCTACCTTCAGCCGCCTGTAACTCACCACAAACACATAATTCAGGAGCATTTAGAAATCAGCCTCCTGTTAGACCGGCTTCTTTAGGCACGGATTCCTTTGATGCTGGAATTTGTGGGCCTTCTAATATGTTGGATTATAATCGGTGTAACGAAAACTGGCAGAATGCAGAACAGTTGTCTAAACTTCCTGCCAATCCCTTGCCATTGTGTGAGCCGTTCAATAATGATCCACTCCCTCCCACTGGCATAAATGTTGCCAACACAAGTACTCGTATTGGTAACAGTCCTGTTGATTATTCATCCAGAGTCGCGATTTCTGTTCCTTTGGAGGATACAAGAAATGAGCTGCAGCGCCAAGAAGGCTTAATTGAAAATATTGTACAGCCTTCGAGTTATACAACACCATCACAAAGGTGGGAAGAACATAAACTTGAATACAGCCAAAACATGAGCCGTCCCTTCAACTCTGTAAACTCTCATGTTTCTTCAAGTCGAGTAACAAGTTCTTTGGGGCATAATTTAAACCAAACAAATGCAACTTGCAGCAACAGTGTTGATGCCTCATTTGTTGGCCAACTGAGTGGAGCTCCCCCATCAATCATCCAGTGCACTAATGTTGACACAAGATTGAAGTCAAATGATGCCTACATCTTGGAGCTAATGAAGTCCCGGGATGGATTTATTCAGAATAATTTTGGCACCTTGGATGACATAATGGTCCCAATGGTCAAAAGGTTTCTGATGCAGGAACAAAATGAACCGACATTTATAGATGGAGAAATGGGATTTGAGGCTTACCCCGTTGGATCATGTATCTGA 2064 0.4365 MTVEDQIDRFPVGMRVLAVDDDPTCLKVLENLLRKCQYQVTTTNQAIEALRMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSGHSDTKLVMKGVTHGAVDYLLKPVRIEELKNIWQHVVRRKNFDPRDQNKGSNDKRGPNAAGEGNQSIISEDGSDQNKNLGKKRKDQTEEEEDDGEDNGEDNDDPSSQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKKATQQASMVAALGNTESYLRIGSIDAYAEFCTSSGSGKIPNPALQSYASSGIFGRLNSPASLSMRGISASTLIQPPVQPQNLNSTLSPLGNIQASIFPANQTSSLLQGIPTSIELNQSKQNNCTTGITQVNQVSCSGFTAASGFRDRRLTVGTASNALPSAACNSPQTHNSGAFRNQPPVRPASLGTDSFDAGICGPSNMLDYNRCNENWQNAEQLSKLPANPLPLCEPFNNDPLPPTGINVANTSTRIGNSPVDYSSRVAISVPLEDTRNELQRQEGLIENIVQPSSYTTPSQRWEEHKLEYSQNMSRPFNSVNSHVSSSRVTSSLGHNLNQTNATCSNSVDASFVGQLSGAPPSIIQCTNVDTRLKSNDAYILELMKSRDGFIQNNFGTLDDIMVPMVKRFLMQEQNEPTFIDGEMGFEAYPVGSCI* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1944 687 MobiDBLite consensus disorder prediction 135 202 - -
Ahy13g1944 687 SUPERFAMILY CheY-like 13 135 IPR011006 -
Ahy13g1944 687 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
Ahy13g1944 687 CDD REC_typeB_ARR-like 16 130 - -
Ahy13g1944 687 PIRSF RR_ARR_type-B 1 678 IPR017053 GO:0003677|GO:0003700|GO:0009736
Ahy13g1944 687 MobiDBLite consensus disorder prediction 151 167 - -
Ahy13g1944 687 Pfam Response regulator receiver domain 16 124 IPR001789 GO:0000160
Ahy13g1944 687 SMART REC_2 14 126 IPR001789 GO:0000160
Ahy13g1944 687 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 258 IPR017930 -
Ahy13g1944 687 SUPERFAMILY Homeodomain-like 200 259 IPR009057 -
Ahy13g1944 687 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 664 - -
Ahy13g1944 687 Pfam Myb-like DNA-binding domain 204 254 IPR001005 -
Ahy13g1944 687 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 202 255 IPR006447 GO:0003677
Ahy13g1944 687 Gene3D - 198 260 - -
Ahy13g1944 687 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 664 IPR045279 GO:0009736
Ahy13g1944 687 Gene3D - 13 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1944 Ahy-Chr13 33892673 33897797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1944 1 380 Response Regulator Gene Family AT2G25180 57.179 1.24e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Ahy13g1944 Response_reg 1.90E-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1944 K14491 - gmx:100807822 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1944 13 33892673 33897797 Ahy13g1944 13 33892673 33897797 ECH