Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1911 ATGTGTTGGCAAGTGGATGCTGTGAGGATGTTGGAATCATGTTGGATAGTAGATGAGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGATTTCTGGATGGAGGGCAATGGTGGTGTGTCGAATGCACAGGACACAATGTTTGATACGAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGGATTTTTGGGTTTGGATGGGTTGCGAGCAGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAGGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCACGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATCGTGCGGTATACTTTTGTTTGTAATAGGCAAAGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTCGTTACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTTTCGCGTTTTGTCGAGGAGCATAACCACAAACTTGCGTATGGAAAGCTTGTTGATTATTTTCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAAGGAGATTAGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTGGGGGGTTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGATGAAGATTATGGGATTTTCGGCGATGTGCTAGCATTCGACGCTACGTATGGCCGCAACAAGTACAACCTACCCGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTTGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCGGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCAGTCTGTATTTCCTGATGCACATCATCGGTTGTATGCCTGA 1092 0.4689 MCWQVDAVRMLESCWIVDEVIMASSSKFWKDACMWNEPLADFWMEGNGGVSNAQDTMFDTRVEEDAELSDWEGRGASMLPGFLGLDGLRAEDVLEMEFSSPQEAGGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQRFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKDGSGRWYVSRFVEEHNHKLAYGKLVDYFRSHRKISEVEVAQLTSMKEIRISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLYA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1911 363 PANTHER OS02G0262500 PROTEIN 92 253 - -
Ahy13g1911 363 PANTHER OS02G0262500 PROTEIN 268 362 - -
Ahy13g1911 363 Pfam MULE transposase domain 275 361 IPR018289 -
Ahy13g1911 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 253 IPR031052 GO:0006355
Ahy13g1911 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 268 362 IPR031052 GO:0006355
Ahy13g1911 363 Pfam FAR1 DNA-binding domain 107 196 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1911 Ahy-Chr13 32534331 32538500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g1911 FAR1 3.60E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1911 - - aip:110269425 747.273