Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1906 ATGTGTCCCACACGCGGACACGACAACTTAGCGAAGTGTCCGTGCTTCATAGCTCTTAAGCAATTCATGAATGAAATCGAGATCTTAAGACCCTTGCACCATAGAAACCTGGTTTCACTCTACGGCCGCAGCTCTGGTGAGCATAACGAACTCTTTCTAGTCTACGAGTACGTCCCCAATGGCACTCTCTCTAGACATATTCATGGAGGTAAAATTGAAAAGCTACCATGGCTTACTAGATTGAATATTGCCATAGAAACTGCAACTGCATTGGCATCATATCTTCATGATTCAGGTATCATACACCGTGATGTAAAAGGAAGTAATATCCTCTTGGATGAAAATTTTTCTGTTAAAGTTGCAGATTTCGGACTCTCACGGTCCCTACCAGATTATATTACTCATGTGTCAACAGCTCCAGCAGGGACAAATGCCTATATGGATCCGAAATATTTCCAAACAGGCAGGGTTTCCTATAGAAGTGATGTATATAGCTTTGGAGTGGTCTTGTTTGAGCTCATATCATCTGAACCTGCATTCTGGAGGGAAGTCCCACAAGGCGAGGCGGTTGGCCTTGCTAAGTTTGCAATAATCAAACTGTTAAATAACACATTGAAGGAGCTAGTAGATCCAGATATTGGGTATGATTCAGATAAAGATGTAATGGAAATGGTAGCAGCAGTGGCAGAGTTGGCCTTTCAGTGCATTCAGTGTCCTAAAGAGCTTAGACCTTCCATGAAACAGGTGCTGGAGACCCTTGAGGGTATAAAGAAGGGAACATGGGGATTCAACCAGATAATTTAG 804 0.4279 MCPTRGHDNLAKCPCFIALKQFMNEIEILRPLHHRNLVSLYGRSSGEHNELFLVYEYVPNGTLSRHIHGGKIEKLPWLTRLNIAIETATALASYLHDSGIIHRDVKGSNILLDENFSVKVADFGLSRSLPDYITHVSTAPAGTNAYMDPKYFQTGRVSYRSDVYSFGVVLFELISSEPAFWREVPQGEAVGLAKFAIIKLLNNTLKELVDPDIGYDSDKDVMEMVAAVAELAFQCIQCPKELRPSMKQVLETLEGIKKGTWGFNQII* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1906 267 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 266 IPR044652 -
Ahy13g1906 267 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1906 267 SMART serkin_6 5 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1906 267 PIRSF ILK 16 210 - -
Ahy13g1906 267 PIRSF ILK 215 265 - -
Ahy13g1906 267 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 266 - -
Ahy13g1906 267 SUPERFAMILY Protein kinase-like (PK-like) 17 257 IPR011009 -
Ahy13g1906 267 Gene3D Phosphorylase Kinase; domain 1 14 58 - -
Ahy13g1906 267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Ahy13g1906 267 Pfam Protein kinase domain 20 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1906 267 Gene3D Transferase(Phosphotransferase) domain 1 59 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1906 Ahy-Chr13 32396567 32397370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1906 19 257 Receptor kinase-like Gene Family AT1G25390 56.198 1.38e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy13g1906 Pkinase 7.80E-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1906 - - gsj:114418636 333.954