Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1830 ATGGGAGGACCTTACCCAAGAATACATGATCCGAAGTTGAAAGAAAGTTGTTTGATTTATTTATTTATTTATTTATTGTCAGTTCACTATACCGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGAAGAGATATGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCTGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGTGGTTTGTTTAAGAAGATACTTGTTGAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTGGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTACCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGACAAAAAGTAATTTTGACTGTAAAGCCACAATGTGAGTTATATGAATGCTATTTTGTTCATAACTTCATTTCATTTTATTATGAGGTTGAATTAGTATCTTTTATGAAGGATAAGGAATCTTGGGACATAGAAACTCCAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCATAGAATATGATACCAACTTCAGCATTAAAGAGAAGAAGAGTGCCAAGGACTTGAAGATTGCTTGCAATTTGAATGATGCAGCTTGCAAGTTGAAGTTGAAAGATTATAAACAAGCAGAGAAATTGTGTACAAAGGTTTTGGACCTTGAGAGCACAAATGTGAAAGCACTCTATAGAAGAGCACAAGCATATATCCAGTTAACTGACTTGGATTTGGCAGAATTTGATATCAAGAAAGCACTTGAGATTGACCCTAATAACAGGTATATTTTCTCTTCAGTTGGATTGCCAGTAATGCATAATAGTAATCTGTACTCTGCATTATTATCGGTTTCTGATGATGATGATAGCAAGAAGGAGAGCATCACCGATCTTATTAATGCGGGTAATGATCGTCGCAAAACCATTTCTTATTACGTGGCGGTTATTCCAACGATTAGCTAA 1242 0.3816 MGGPYPRIHDPKLKESCLIYLFIYLLSVHYTGTLLDGTKFDSRRDMGAPFTFTLGQGQVIKGWDEGIRSMKKGENALFTIPPELAYGESGSPPTILPKATLQFDVELLSWTSVKDICKDGGLFKKILVEGEKWENPKDPDEVLVNYEARLEDGTLVKKSDGVEFTVEDGHFYPALSKAIKTMKKGQKVILTVKPQCELYECYFVHNFISFYYEVELVSFMKDKESWDIETPEKIEAAGKKKEEGNALFRAGKYAKASKRYEKAIKFIEYDTNFSIKEKKSAKDLKIACNLNDAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLTDLDLAEFDIKKALEIDPNNRYIFSSVGLPVMHNSNLYSALLSVSDDDDSKKESITDLINAGNDRRKTISYYVAVIPTIS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1830 413 SUPERFAMILY FKBP-like 117 237 - -
Ahy13g1830 413 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 139 220 IPR001179 GO:0003755
Ahy13g1830 413 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 212 355 - -
Ahy13g1830 413 Gene3D Tetratricopeptide repeat domain 223 361 IPR011990 GO:0005515
Ahy13g1830 413 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 23 111 IPR001179 GO:0003755
Ahy13g1830 413 Pfam Tetratricopeptide repeat 320 353 IPR001440 GO:0005515
Ahy13g1830 413 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 27 200 - -
Ahy13g1830 413 Gene3D - 24 114 IPR046357 GO:0003755
Ahy13g1830 413 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 26 108 IPR001179 GO:0003755
Ahy13g1830 413 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 134 196 IPR001179 GO:0003755
Ahy13g1830 413 ProSiteProfiles TPR repeat profile. 320 353 IPR019734 GO:0005515
Ahy13g1830 413 Gene3D - 115 220 IPR046357 GO:0003755
Ahy13g1830 413 SMART tpr_5 237 270 IPR019734 GO:0005515
Ahy13g1830 413 SMART tpr_5 320 353 IPR019734 GO:0005515
Ahy13g1830 413 SMART tpr_5 286 319 IPR019734 GO:0005515
Ahy13g1830 413 PANTHER PEPTIDYLPROLYL ISOMERASE 212 355 - -
Ahy13g1830 413 SUPERFAMILY TPR-like 233 362 IPR011990 GO:0005515
Ahy13g1830 413 SUPERFAMILY FKBP-like 26 116 - -
Ahy13g1830 413 PANTHER PEPTIDYLPROLYL ISOMERASE 27 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1830 Ahy-Chr13 30292587 30297340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1830 28 356 Calmodulin-binding Proteins AT3G25230 50.000 1.54e-104 318