Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1805 ATGTTGTTATCGGCTTCGCCATCTTCTTTGGCGAAGAGCTCTCTGGAAGAGATGCTTGATTCTCTTCGTCGGAAAGAGGAAGAGGAAGCAAAGCCGAAGGACTTGCCTCCGGCATTGCCGGCACGGCCGGCCTCCCGTGCACGGCTGCCTCCGGCGAGGCGGTCTTTGCCGAATAACTTTAAGGTCGGAGACGGCAGTAACGCCATGCCGGAGTGCTTGCCGAATGGGTTTGATTGTAAGAGAAAGGAAGATGAGCTGGGAGAGAAGAGAAGAAGTGATGGTTTTGGGAGCAAGAAGGTGAAGATGATGATGGATGCGGATTCCCCTTATTTAGCTTCGTCTGGGAAGGTTAGGGAATTGGAGGATGATAACATTTCTTACATTATCAAAAAGCTTTGTGTCTGGTGTAGACAACCAAGTGGACTGTGGGAACTAGGTACGATACAGTCAACCTCGGGAGAGGAAGCATCTGTTTTACTCTCAAATGGAAATGTTATTAACGTGGCCAGGTCAGAGTTTGTACCAGCTAATCCTAAAATATTTGAGGGTGTAGACGATCTCATGAAGCTCTGTTATTTGAATGAGCCATCAGTTCTTCACAATATTAAGTTCAGACATTCTCAGGACATGATTTATACTAAAGCAGGGCCCATTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATTTTTGGAAATGATCGTATTTCAGCTTATAAGCAGAAATTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACGAAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCAAAGATTGCTATGCAGTACTTAGCTGCTGTTGGTCGTAGTAATAGGGGTACAGAAGAAAAAATTCTTCAAACAAATCATGTGCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATTGAAATTCATTTCAGCACAATGGGTAAAATCTATGGGGCTAAAGTTCAAACATTTTTGATAGAAAAGTCCAGAGTTGTTCAGCTGGCCAGTGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTCGATATTGTCCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTAAGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCATTCAAAGTTGCAGACAGTGAGAATGACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCTCCCAGGCATTGAAGGCAGCATTATCTACCAAGAAAATCCAGCCTGAGAAGGATACTAATACAAAAAAATTGATATTGCAGCAGGCAATTCAAACGAGAGACGAAATTGCAAAATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAATCAACAGGTCACTTCAAGTGGGTAAAAGATGTACTGGGAAATCCATAAATATCTTGGATATTACTGGTTTTGAATCATTCCAGAAAAGTAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACAGCATCTCAATCGGCATCTGTTTAAGCAAGAGCAGGAGGACTATGAGTCAGATGGCATTGAGTGGACTAAAATATATTTTAAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAGGAAACCTCACAGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCTAAGGCTTCTGATCTAACGTTTGCAAACAAACTTAAGCAGCACTTGGGTACTAATCCTTGCTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACGAATGGCTTTCTAGAAAAGAACAGAGATTTTATGCCTTCCGATTCCGTTCAATTCCTTGCATCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCGGCACAGGTGCAGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTTCAATCATTTGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAACCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTACCCTGGGATCTCGAACAGCTGTGAACACTCCAATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAGTGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGATGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 3534 0.4154 MLLSASPSSLAKSSLEEMLDSLRRKEEEEAKPKDLPPALPARPASRARLPPARRSLPNNFKVGDGSNAMPECLPNGFDCKRKEDELGEKRRSDGFGSKKVKMMMDADSPYLASSGKVRELEDDNISYIIKKLCVWCRQPSGLWELGTIQSTSGEEASVLLSNGNVINVARSEFVPANPKIFEGVDDLMKLCYLNEPSVLHNIKFRHSQDMIYTKAGPILIAVNPFKDLQIFGNDRISAYKQKFTNSPHVFAVADEAFTKMMRDEANQSIIISGESGSGKTETAKIAMQYLAAVGRSNRGTEEKILQTNHVLEAFGNAKTSRNENSSRFGKLIEIHFSTMGKIYGAKVQTFLIEKSRVVQLASGERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFKVLAAILWLGNISFKVADSENDIEVLDDEAVTSAARLMGCSSQALKAALSTKKIQPEKDTNTKKLILQQAIQTRDEIAKFMYENLFNWIVDQINRSLQVGKRCTGKSINILDITGFESFQKSSFEQFCINYANERLQQHLNRHLFKQEQEDYESDGIEWTKIYFKDNQECLDLFERKPHSLLSLLDEESNLPKASDLTFANKLKQHLGTNPCFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDFMPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFGTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFLLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATFQSFVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQPTRNEVLSPRYYGSEDATLGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTSGTLSSLMKEFDQRRQNFDDEVKALNDVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1805 1177 CDD MYSc_Myo8 196 840 IPR036022 -
Ahy13g1805 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 422 530 - -
Ahy13g1805 1177 Gene3D - 553 742 - -
Ahy13g1805 1177 MobiDBLite consensus disorder prediction 1 67 - -
Ahy13g1805 1177 Coils Coil 1147 1167 - -
Ahy13g1805 1177 PANTHER MYOSIN-2 ISOFORM X1 128 1175 - -
Ahy13g1805 1177 Gene3D Kinesin motor domain 181 785 IPR036961 -
Ahy13g1805 1177 SMART MYSc_2a 176 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 Coils Coil 1102 1122 - -
Ahy13g1805 1177 SMART iq_5 876 898 IPR000048 GO:0005515
Ahy13g1805 1177 SMART iq_5 853 875 IPR000048 GO:0005515
Ahy13g1805 1177 SMART iq_5 912 934 IPR000048 GO:0005515
Ahy13g1805 1177 ProSiteProfiles IQ motif profile. 856 883 IPR000048 GO:0005515
Ahy13g1805 1177 Gene3D - 856 903 - -
Ahy13g1805 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 903 IPR027417 -
Ahy13g1805 1177 ProSiteProfiles Myosin motor domain profile. 182 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 MobiDBLite consensus disorder prediction 1 15 - -
Ahy13g1805 1177 ProSiteProfiles IQ motif profile. 913 941 IPR000048 GO:0005515
Ahy13g1805 1177 PANTHER MYOSIN 128 1175 - -
Ahy13g1805 1177 Gene3D - 365 421 - -
Ahy13g1805 1177 MobiDBLite consensus disorder prediction 17 35 - -
Ahy13g1805 1177 Coils Coil 974 1015 - -
Ahy13g1805 1177 Gene3D - 786 853 - -
Ahy13g1805 1177 PRINTS Myosin heavy chain signature 594 622 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 PRINTS Myosin heavy chain signature 309 336 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 PRINTS Myosin heavy chain signature 266 291 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 PRINTS Myosin heavy chain signature 541 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 PRINTS Myosin heavy chain signature 212 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 129 178 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 ProSiteProfiles IQ motif profile. 877 905 IPR000048 GO:0005515
Ahy13g1805 1177 Pfam Myosin head (motor domain) 184 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1805 1177 Pfam IQ calmodulin-binding motif 858 875 IPR000048 GO:0005515
Ahy13g1805 1177 Pfam IQ calmodulin-binding motif 915 932 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1805 Ahy-Chr13 29311110 29322927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1805 1 1174 Myosins gene family AT5G54280 57.433 0.0 1366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1805 K10357 - gmx:100801876 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1805 13 29311110 29322927 Ahy13g1805 13 29311110 29322927 ECH