Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1804 ATGCCTTCCGATTCCGTTCAATTCCTTGCATCATGTGCAGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTTCAATCATTTGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAATGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAACCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTACCCTGGGATCTCGAACAGCTGTGAACACTCCAATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAGTGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGATGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 1425 0.4182 MPSDSVQFLASCAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFLLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATFQSFVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQPTRNEVLSPRYYGSEDATLGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTSGTLSSLMKEFDQRRQNFDDEVKALNDVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1804 474 Gene3D - 7 39 - -
Ahy13g1804 474 Coils Coil 399 419 - -
Ahy13g1804 474 SMART iq_5 150 172 IPR000048 GO:0005515
Ahy13g1804 474 SMART iq_5 173 195 IPR000048 GO:0005515
Ahy13g1804 474 SMART iq_5 209 231 IPR000048 GO:0005515
Ahy13g1804 474 Pfam IQ calmodulin-binding motif 155 172 IPR000048 GO:0005515
Ahy13g1804 474 Pfam IQ calmodulin-binding motif 212 229 IPR000048 GO:0005515
Ahy13g1804 474 ProSiteProfiles IQ motif profile. 174 202 IPR000048 GO:0005515
Ahy13g1804 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 200 IPR027417 -
Ahy13g1804 474 ProSiteProfiles IQ motif profile. 210 238 IPR000048 GO:0005515
Ahy13g1804 474 Gene3D Kinesin motor domain 40 82 IPR036961 -
Ahy13g1804 474 PANTHER MYOSIN 13 472 - -
Ahy13g1804 474 Coils Coil 444 464 - -
Ahy13g1804 474 Gene3D - 198 323 - -
Ahy13g1804 474 Coils Coil 271 312 - -
Ahy13g1804 474 Pfam Myosin head (motor domain) 16 137 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1804 474 Gene3D - 153 197 - -
Ahy13g1804 474 Gene3D - 83 150 - -
Ahy13g1804 474 ProSiteProfiles Myosin motor domain profile. 1 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1804 474 ProSiteProfiles IQ motif profile. 153 180 IPR000048 GO:0005515
Ahy13g1804 474 SMART MYSc_2a 1 150 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy13g1804 474 PANTHER MYOSIN-2 ISOFORM X1 13 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1804 Ahy-Chr13 29302040 29306739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1804 1 471 Myosins gene family AT5G54280 48.054 3.00e-147 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1804 K10357 - ahf:112737879 934.48