Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1780 ATGGGAAACTTCAAAATGTTACTTATTTTGTTATTTCTAGTATCCTACATGAGAGGCTCGACTTCTTTACACAATTTAGGAATGAGTGAATGTATTCGTGATGGTGGCGAGACTTTGCTTTCAGCTGATGCAAGTTTCGAACTGGGTTTCTTCAGCCCTGGAACTTCAACAAATCGATATTTGGGTGTCTGGTACACAGATGTATCAGGAAAGCAAACAGTTGTGTGGGTGGCCAACAGAGAAACACCACTCCACAACAAGTCAGGGATCCTCATGTTAAACGAAATGGGGATTCTTCAACTTCGCACCGGGGCAAACGCTACTATTCTTTGGTCGTCCAAGGTATCAGACGAAGCCTTTAATTTGAGTAATTCAACAGCAGAGCTCTTTGATTCAGGAAATCTTGTGGTGAAAAGTGGGCAGGATGAGGGCAGCTTCTTGTGGCAGAGTTTTGATTATCCCTGTGACACTTTGATGCCGGGAATGAAGCTCGGACTAAAATCTGGCATAGATAGATATTTGTCAAGCTGGAAAAGTACAGATGACCCTGCAGTGGGAGAATATTCCATCAAAATTGATCGTAAAGGGTATCCGCAACTAGTTCAGATGAAAGGATCCTTCATTAACGCTAGAGAGGGCTCATGGAATGGCATTTATTTCACTGGATATCCGAATCTGCAACAGAGCATTTTTAAACGAGAATTTGTATTCAGTGATAGAGAGGTGTATTATGAGTTTGATATACTTGATAGATCAATTTTCAAAATATTTAGAGCGACCCCTTCAGGTGGTTGGGAAAACATGGTATGGACAAGTCAAACTGCGGAAACTACTACGTCCGGGGGGCAGGATGCATGCGACAGTTATGCATTCTGCGGTTCGAATTCTGTATGCAACATTGGTGATAATGTTGCATCATGTGAATGCCTCAAAGGATATGTTCCCAAGTTTCCTCAACAATGGAATGTGTCATATTGGTCCAATGGTTGTGTTAGAAAGACTTCATCGACGTGTAATAACACACAAGGCTTCTTGAGGTACAAAGACATGAAATTGCCGGACACATCTTCTTCATGGTTTAATAACGCAATGAATCTTGAGGAATGTCAGAAGACATGCTTGAAAAATTGTTCTTGTACGGCTTATGCGAATTTGGATATTCGTAATGGAGGAACTGGTTGTCTGCTTTGGTTTGATCACCTTATTGACATTCGGCAATTCTCACAAGAGGGTCAAGACCTGTACATCAAAGTCCCTAGTTCTGAGTTAGCTAATGACCATGGAAACAAGAAGATAAAGACGGTAGCAATTGCTGTTGGAATGATTATTTTTGGATTAATCTGTTGGGTTACCATAATGCTAATTAAATATCCAGGGTTCGCAAGAAATATAAGGAAAAATAAACAAAGACAAGATGTTGATCTCCCAATATTTGATTTCTCAGTCTTAGCTAAAGCTACAGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGCTACTATAAATGGTCAAGAACTAGCAGTTAAAAGACTTTCAAAAAAGTCTGGCCAAGGATCAGAAGAATTCAAAAATGAGGTAGTGTTAATAGCCAAGCTTCAACATCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCAGGGGGAAGAAAAAATATTGGTCTATGAATACATGCCTAACAAAAGCTTGGATCACTTTGTTTTTGATGAAACAAGAAGAAAGGCCGTAGATTGGCTTAAGCGTTTTAACATTATTGGCGGCATTGCTCGAGGACTTCTTTATCTCCATCAAGATTCTAGACTAAAGATTATACATAGAGATCTTAAAACTAGTAATATTCTTTTGGATGCAAATTTAAATCCCAAAATATCAGATTTTGGCTTGGCTCGAACATTTTTTGGTGATCAAGTTGAGGCAAATACAAATAGAGTTGCTGGAACATATGGTTATATGCCTCCTGAATATGCAGTACATGGACAATTTTCAGAGAAATCAGATGTATTTAGTTATGGTGTGATAGTATTAGAGTTGTTAAGTGCGAAACGAAATAGGGAATTCTCAGATTCCGAAAACTATCTTAATCTACTTGGACATGCATGGAGATTATGGACTGAGGATAGGCCACTGGAACTATTGGATGAAGTGATAAGGGAAAATTGCAACCATTTTGAAGCCATAAGATGCATACAAGTGGGCTTACTATGTGTGCAACAAAGACCAGAAGATAGGCCAAGTATGTCATTGGTGCTTCTAATGCTAAATGGCGAGAAAATGTTGCCCAAACCAAAATTTCCTGGATTTTACATTGATAGAGGTGTTCAACTTCAAGCAGATTCTTCATTGCCGAACAACACACTCTTTTCAGCTAACCAAATTTCTATAACAATATTAGAAGCTAGATAG 2424 0.3878 MGNFKMLLILLFLVSYMRGSTSLHNLGMSECIRDGGETLLSADASFELGFFSPGTSTNRYLGVWYTDVSGKQTVVWVANRETPLHNKSGILMLNEMGILQLRTGANATILWSSKVSDEAFNLSNSTAELFDSGNLVVKSGQDEGSFLWQSFDYPCDTLMPGMKLGLKSGIDRYLSSWKSTDDPAVGEYSIKIDRKGYPQLVQMKGSFINAREGSWNGIYFTGYPNLQQSIFKREFVFSDREVYYEFDILDRSIFKIFRATPSGGWENMVWTSQTAETTTSGGQDACDSYAFCGSNSVCNIGDNVASCECLKGYVPKFPQQWNVSYWSNGCVRKTSSTCNNTQGFLRYKDMKLPDTSSSWFNNAMNLEECQKTCLKNCSCTAYANLDIRNGGTGCLLWFDHLIDIRQFSQEGQDLYIKVPSSELANDHGNKKIKTVAIAVGMIIFGLICWVTIMLIKYPGFARNIRKNKQRQDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKATINGQELAVKRLSKKSGQGSEEFKNEVVLIAKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDHFVFDETRRKAVDWLKRFNIIGGIARGLLYLHQDSRLKIIHRDLKTSNILLDANLNPKISDFGLARTFFGDQVEANTNRVAGTYGYMPPEYAVHGQFSEKSDVFSYGVIVLELLSAKRNREFSDSENYLNLLGHAWRLWTEDRPLELLDEVIRENCNHFEAIRCIQVGLLCVQQRPEDRPSMSLVLLMLNGEKMLPKPKFPGFYIDRGVQLQADSSLPNNTLFSANQISITILEAR* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1780 807 Pfam S-locus glycoprotein domain 211 317 IPR000858 GO:0048544
Ahy13g1780 807 ProSiteProfiles Protein kinase domain profile. 490 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1780 807 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Ahy13g1780 807 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1780 807 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Ahy13g1780 807 Gene3D Hepatocyte Growth Factor 335 416 - -
Ahy13g1780 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 804 - -
Ahy13g1780 807 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 18 804 - -
Ahy13g1780 807 SMART blect_4 30 154 IPR001480 -
Ahy13g1780 807 CDD STKc_IRAK 496 762 - -
Ahy13g1780 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Ahy13g1780 807 CDD PAN_AP_plant 334 419 - -
Ahy13g1780 807 CDD B_lectin 35 154 IPR001480 -
Ahy13g1780 807 Pfam PAN-like domain 338 404 IPR003609 -
Ahy13g1780 807 Gene3D - 25 151 IPR036426 -
Ahy13g1780 807 Pfam D-mannose binding lectin 73 178 IPR001480 -
Ahy13g1780 807 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Ahy13g1780 807 Pfam Protein tyrosine and serine/threonine kinase 492 756 IPR001245 GO:0004672|GO:0006468
Ahy13g1780 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Ahy13g1780 807 Gene3D Transferase(Phosphotransferase) domain 1 565 768 - -
Ahy13g1780 807 SMART ntp_6 338 418 IPR003609 -
Ahy13g1780 807 SUPERFAMILY Protein kinase-like (PK-like) 474 774 IPR011009 -
Ahy13g1780 807 PIRSF SRK 2 807 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1780 Ahy-Chr13 28808623 28812037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1780 478 792 Receptor kinase-like Gene Family AT4G23140 58.333 4.02e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy13g1780 PK_Tyr_Ser-Thr 2.60E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1780 - - aip:107614884 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1780 13 28808623 28812037 Ahy13g1780 13 28808623 28812037 ECH