Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1777 ATGTTACTTACCTTCTTCTTTCTAATGTTCTTCGTTACACCCTCCACTTCGATAGATAGTTTTGGAATGAATCAATCTATTCGCGACGGTGAAACATTGGTTTCAGCTGGTGGAAGTTTCGTGGTTGGTTTCTTCAGCCCTGGAACTTCAACAAACCGATATTTGGGTGTGTTTTATAAAGATGCATCAGGAAACCAAACGGTTATGTGGGTAGCCAACAGAGAAAAGCCCCTTCAAAACAAATCCGGGATCTTAAAGTTCAATGAAAATGGGACTCTCCAACTTTTCAGTGGCACAACCAACACCAGTGTTTGGTCCTCCAACATTTCAACCAAAGACTTGAACAGTAACTCTTCAACTGCACAGCTCCTGGATTCGGGAAATCTTATAGTGAAAAGTTCAGATGATGGAAGCAAGATTCTGTGGCAGAGTTTCGATTTTCCCGGCGACGTATTGATGCCGGGAATGAAGATTGGATTGAATTTAGTTACAGGTCTGGATAGATATCTGTCAACCTGGAAAAGCGCCGACGACCCGGCCCGGGGAGATTATTCTATAAAATTTGATCCCAGAGGATATCCACAAATAATTCAAATGAAGGGGGTTGTATTGAATGCCAGAGAAGGGTCCTGGAATGGCCTTTATTTCACTGGCTATCCATATTTGGTGCAGAACAATATGTTTCGACGCGACTTCTTTTTTAACGGTGAAGAAATGTATTATAAGTCGGAAATTCTTGACGGATCAACTTTTAGAATAAATCGAATGATGCCTTCAGGTATTTGGCAAACTACTACATGGACGGGACAAGGAAGAGGTCAGGTGAAAACAACCACATCCGGGGGACTGGAAGATTGTGACAATTTTGCATTTTGTGGTTCAAATTCTGTATGCAATATGGTTGATAATGATGCAGCCTGTGAGTGCCTCAAAGGTTATGTTCCAAAGTTTCCTGAACAATGGAATGTGTCACATTGGTCTAACGGTTGTGTTAGAAAGACTGCGTCTAAGTGTGATATTACAGACGGATTCTCGAAATACATAAACATGAAATTGCCGGATACATCTTCTTCATGGTTTGATAAGACAATGAATCTTGAGGAATGTCAGAGGTCATGCTTGAAAAACTGTTCCTGTACGGCGTATGCGAATTTGGATATCCGTAATGGAGGAACTGGCTGTCTACTTTGGTTCAATCATCTTGTTGACATGAGGCAATTTAATCAAAGGGGTCAAGACCTTTTCATCAAAGTCCCTAACTCAGAGTTAGCTAATGAACATGGAAACATGAAGAAGAAGAAGAATGTTGCAATTGTAGTAGCTGGAGTGATTATTTTTGGATTAATCATATGTGCCAGCATAGTGCTCATTAAATATCCAGGGTTAGCAAGAAATATATGGAAAAACAAGCAAAGACAGGTAGACGTTGATCTCCCAATATTCGATTTCTCAGTCTTAGCTAAAGCTACTGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGTACATTAATAAATGGTCAAGAACTAGCCGTTAAAAGACTTTCAAAAAAGTCTGGCCAAGGATCGGAAGAATTCAAAAATGAAGTAGCATTGATAGCCAAACTCCAACACCGTAATCTTGTAAAGCTTCTCGGTTGTTGCATTCAGGGAGGAGAAAAAATATTGATCTATGAATTCATGCCAAATAAAAGTTTGGACCACTTTGTTTTTGGCGATCAAGTTGAAGCGAATACAAATAAAGTTGCTGAAACATATGGATATATGTCGCCCGAATATGCAGTGCATGGACAATTCTCAGAGAAATCAGATATATTTAGTTATGGTGTAATAGTATTAGAGTTGTTAAGTGGAAAAAGAAATAGAGATTTTTCAGATTCTGAAAACTACCATAATCTACTTGGACATGCATGGAGATTGTGGACTGAGGAGAAGCCATTGGAACTATTGGATGAAGTATTGAGGGAAAATTGCAACCCTTCTGAAGTCATAAGATGCATACAAGTGGGCCTACTATGTGTGCAACAAAGACCAGAAGATAGGCCGAATATGTCATTGGTGGTTCTAATGCTAAATGGCGAGAAAATGTTGCCCAAACCAAATTTTCCTGGATTTTACATTGATAGAGGTGTTCAACTTCAAGCAGATTCATCATTGCCGAACAACACACTCTTTTCAGCTAACCAAATTTCCATAACAATATTAGAAGCTAGATAG 2241 0.3927 MLLTFFFLMFFVTPSTSIDSFGMNQSIRDGETLVSAGGSFVVGFFSPGTSTNRYLGVFYKDASGNQTVMWVANREKPLQNKSGILKFNENGTLQLFSGTTNTSVWSSNISTKDLNSNSSTAQLLDSGNLIVKSSDDGSKILWQSFDFPGDVLMPGMKIGLNLVTGLDRYLSTWKSADDPARGDYSIKFDPRGYPQIIQMKGVVLNAREGSWNGLYFTGYPYLVQNNMFRRDFFFNGEEMYYKSEILDGSTFRINRMMPSGIWQTTTWTGQGRGQVKTTTSGGLEDCDNFAFCGSNSVCNMVDNDAACECLKGYVPKFPEQWNVSHWSNGCVRKTASKCDITDGFSKYINMKLPDTSSSWFDKTMNLEECQRSCLKNCSCTAYANLDIRNGGTGCLLWFNHLVDMRQFNQRGQDLFIKVPNSELANEHGNMKKKKNVAIVVAGVIIFGLIICASIVLIKYPGLARNIWKNKQRQVDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKGTLINGQELAVKRLSKKSGQGSEEFKNEVALIAKLQHRNLVKLLGCCIQGGEKILIYEFMPNKSLDHFVFGDQVEANTNKVAETYGYMSPEYAVHGQFSEKSDIFSYGVIVLELLSGKRNRDFSDSENYHNLLGHAWRLWTEEKPLELLDEVLRENCNPSEVIRCIQVGLLCVQQRPEDRPNMSLVVLMLNGEKMLPKPNFPGFYIDRGVQLQADSSLPNNTLFSANQISITILEAR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1777 746 CDD PAN_AP_plant 341 419 - -
Ahy13g1777 746 CDD B_lectin 24 148 IPR001480 -
Ahy13g1777 746 Pfam D-mannose binding lectin 67 174 IPR001480 -
Ahy13g1777 746 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 579 743 - -
Ahy13g1777 746 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 579 - -
Ahy13g1777 746 Gene3D Phosphorylase Kinase; domain 1 467 568 - -
Ahy13g1777 746 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 579 743 - -
Ahy13g1777 746 Pfam PAN-like domain 338 404 IPR003609 -
Ahy13g1777 746 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Ahy13g1777 746 Gene3D Transferase(Phosphotransferase) domain 1 569 707 - -
Ahy13g1777 746 PIRSF SRK 579 746 IPR024171 GO:0004674
Ahy13g1777 746 PIRSF SRK 1 584 IPR024171 GO:0004674
Ahy13g1777 746 ProSiteProfiles Bulb-type lectin domain profile. 18 144 IPR001480 -
Ahy13g1777 746 ProSiteProfiles EGF-like domain profile. 282 319 IPR000742 -
Ahy13g1777 746 SUPERFAMILY Protein kinase-like (PK-like) 476 712 IPR011009 -
Ahy13g1777 746 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 179 IPR036426 -
Ahy13g1777 746 SMART ntp_6 339 418 IPR003609 -
Ahy13g1777 746 SMART blect_4 24 148 IPR001480 -
Ahy13g1777 746 Gene3D - 15 145 IPR036426 -
Ahy13g1777 746 Pfam Protein tyrosine and serine/threonine kinase 495 580 IPR001245 GO:0004672|GO:0006468
Ahy13g1777 746 Pfam Protein tyrosine and serine/threonine kinase 589 696 IPR001245 GO:0004672|GO:0006468
Ahy13g1777 746 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Ahy13g1777 746 ProSiteProfiles Protein kinase domain profile. 493 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1777 746 Gene3D Hepatocyte Growth Factor 335 416 - -
Ahy13g1777 746 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 13 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1777 Ahy-Chr13 28790112 28795052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1777 468 714 Receptor kinase-like Gene Family AT4G38830 38.924 1.67e-56 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy13g1777 PK_Tyr_Ser-Thr 5.30E-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1777 - - ahf:112776722 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1777 13 28790112 28795052 Ahy13g1777 13 28790112 28795052 ECH