Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1769 ATGCCAGGAATGAAACTTGGATTAAACTTAGTTACTGGTCTGAATAGATTTCTATCGTGTTGGAAAAGCTCAAATGACCCTGCTATAGGAGAGTATTCTTTAAAAATTAAACCCAAAGGGTATCCGCAACTAGTACAAATGAAGGGATCAGTAATAGTTACTAGAGCAGGACCATGGAATGGTCTTTCTTTTTCAGGATATCCATATGCCAACAACATATATAGCATCGATTTTGTAGTGAATGATGAAGAGATTTATTATCAGGTCACAATGAGTGATAGGTCCCTTTTCTCCATATACAGAACAATCACTTCAGGTACGGGTAATGTTTTGGTTTGGACAAGTCAAACAAGAAATCAGGTTAAAAACACTCCAACTCAGCTGGTAGATCAGTGTGAAATGTATGCCTTTTGTGGTTCAAATTCTATATGCTATATGGATGGTAATGCTCCAACATGTGAATGTTTGAAAGCATATGTTTCCAAATTTCCCAGACAATGGAATATGTCTGATTGGTCTAGTGGTTGCGTCAGAAAGACTTGGTTAGATTGTAATAACACAGATGGGTTCCTGAGGTACAGAGATATGAAGTTGCCAGATACATCTTCTTCAACGTATAATAAGACAATGAATCTTGAGGAATGTCGAGAATCCTGCTTGAAAAACTGTTCTTGTACAGCGTATGCAAATATGGATATTCGTAATGGAGGAAGTGGCTGCCTACTTTGGTTTGATCATCTCATTGACATGAGGATGTTCTCTAAAGGAGGACAAGACCTTTACATTAAAGTCCCTGCTTCAGAATTAGCAGCGGCTAACGGCCATGGGAATATGAAAAATAAGAACGTTGGAATCATAGTAGGTTCGGTTATCTTTGGATTAATCGCATGCGCTGGCACAATGTCGATGATAATTAAAAAGAAAGGTGTAGCAAGAAATATATGCAAGAAAAAGCATAGTTGGAAAGATGTCGATCTACCGATATTTGATTTTTCAGTCATAGCTAAAGCTACAGGAAACTTTGCATCTAATAAAAAGCTTGGAGAAGGTGGTTTTGGTCCCGTATATAAGGGCATACTTCAAGATGGTCGAGAAGTAGCTGTAAAAAGGCTTTCAAAAAGGTCTACTCAAGGGCTGGAAGAATTAAAAAATGAGGTGGTGTTGATAGCTAAACTTCAGCATCGGAATCTTGTCAAGCTTCTTGGTTGTTGTATTCAAGAGTCAGAAAAAATACTAATCTATGAGTTCATGCCTAACAAAAGTTTAGACCAATTTATTTTCGATGAAACTGGACGAAAGCGGCTAGATTGGCTAAAGCGTTTCAACATTATTAGTGGAATTGCTCGAGGACTTTTTTATCTTCATCAAGATTCTATATTGAGGATAATTCATAGAGATCTAAAAACTAGTAATATTTTATTAGATGCAAATTTTAATCCCAAGATATCACATTTTGGTTTAGCTCGAACATTTTTAGATGATCAAGTTGAGGAAAATACAAATAGAATTGCTGGAACATACGGTTATATGCCTCCTGAATATGCATTACGAGGACAATTCTCCATGAAATCAGATATTTTTAGTTATGGTGTAATAATATTAGAGTTGATAAGTGGAAAGAAGAATAGAGAATTTTCAAACTCTGAAAATTACCTTAATCTTCTTGGACATGCATGGAAATTGTGGATTAATGAGAGGCCACTGGAATTATTGGATGAAGTATTAAGGGAATGGTGCAACCCTACTGAAGTCATAAGATGCATACAAGTAGGTTTATTATGTGTGCAACAAAGGCCAGAAGATAGGCCTAACATGTTATCGGTGGTTCTAATGCTAAATGGTGAGAAATGGTTGCCCCAACCAAAATTTCCTGCATTTTATGTAGATTGTGTTGGGACACCGAAAGAAGAATCTTTATCGGCAAACTATGTAAAATTCTCAGCTAATGAAGTTTCCATCACAATGTTGGATGCAAGATAA 1980 0.3636 MPGMKLGLNLVTGLNRFLSCWKSSNDPAIGEYSLKIKPKGYPQLVQMKGSVIVTRAGPWNGLSFSGYPYANNIYSIDFVVNDEEIYYQVTMSDRSLFSIYRTITSGTGNVLVWTSQTRNQVKNTPTQLVDQCEMYAFCGSNSICYMDGNAPTCECLKAYVSKFPRQWNMSDWSSGCVRKTWLDCNNTDGFLRYRDMKLPDTSSSTYNKTMNLEECRESCLKNCSCTAYANMDIRNGGSGCLLWFDHLIDMRMFSKGGQDLYIKVPASELAAANGHGNMKNKNVGIIVGSVIFGLIACAGTMSMIIKKKGVARNICKKKHSWKDVDLPIFDFSVIAKATGNFASNKKLGEGGFGPVYKGILQDGREVAVKRLSKRSTQGLEELKNEVVLIAKLQHRNLVKLLGCCIQESEKILIYEFMPNKSLDQFIFDETGRKRLDWLKRFNIISGIARGLFYLHQDSILRIIHRDLKTSNILLDANFNPKISHFGLARTFLDDQVEENTNRIAGTYGYMPPEYALRGQFSMKSDIFSYGVIILELISGKKNREFSNSENYLNLLGHAWKLWINERPLELLDEVLREWCNPTEVIRCIQVGLLCVQQRPEDRPNMLSVVLMLNGEKWLPQPKFPAFYVDCVGTPKEESLSANYVKFSANEVSITMLDAR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1769 659 SMART ntp_6 185 264 IPR003609 -
Ahy13g1769 659 Gene3D Hepatocyte Growth Factor 181 261 - -
Ahy13g1769 659 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Ahy13g1769 659 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1769 659 Pfam PAN-like domain 184 250 IPR003609 -
Ahy13g1769 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Ahy13g1769 659 ProSiteProfiles PAN/Apple domain profile. 184 265 IPR003609 -
Ahy13g1769 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 657 - -
Ahy13g1769 659 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 657 - -
Ahy13g1769 659 Gene3D Phosphorylase Kinase; domain 1 315 416 - -
Ahy13g1769 659 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1769 659 CDD STKc_IRAK 347 614 - -
Ahy13g1769 659 CDD PAN_AP_plant 182 265 - -
Ahy13g1769 659 SUPERFAMILY Protein kinase-like (PK-like) 326 631 IPR011009 -
Ahy13g1769 659 Pfam Protein tyrosine and serine/threonine kinase 344 609 IPR001245 GO:0004672|GO:0006468
Ahy13g1769 659 Pfam S-locus glycoprotein domain 55 162 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1769 Ahy-Chr13 28603468 28608851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1769 329 659 Receptor kinase-like Gene Family AT4G23140 54.386 4.54e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy13g1769 PK_Tyr_Ser-Thr 7.00E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1769 - - aip:107614884 892.493